TREP, the TRansposable Elements Platform
Fasta file for monococcum elements in total_TREP
Sequences: 169
Total size: 881244 bp
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| Sequence | Size |
|---|---|
| DTT_Tmon_Icarus_BE492871-1 Triticum monococcum; ; Stowaway MITE, complete element | 103 |
| DTT_Tmon_Icarus_BG607724-1 Triticum monococcum; ; Stowaway MITE, complete element | 103 |
| DTT_Tmon_Icarus_BQ168741-1 Triticum monococcum; ; Stowaway MITE, complete element | 113 |
| DTC_Tmon_TAT1_AF492374-1 Triticum monococcum; ; fragment | 271 |
| RLC_Tmon_Angela_231A16-1 Triticum monococcum; ; complete element | 8578 |
| RLC_Tmon_Angela_609E6-1 Triticum monococcum; ; 5' fragment of LTR | 845 |
| RLC_Tmon_Angela_609E6-2 Triticum monococcum; ; complete element | 8720 |
| RLC_Tmon_Angela_609E6-3 Triticum monococcum; ; complete element | 8714 |
| RLG_Tmon_Laura_231A16-1 Triticum monococcum; ; fragment of LTR | 3112 |
| RLC_Tmon_Barbara_609E6-1 Triticum monococcum; ; 3' truncated | 8197 |
| DTC_Tmon_Caspar_231A16-1 Triticum monococcum; ; complete element | 7038 |
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; ; complete element | 11107 |
| RLG_Tmon_Erika_231A16-2 Triticum monococcum; ; complete element | 14106 |
| RLG_Tmon_Fatima_B_231A16-2 Triticum monococcum; ; non-autonomous, fragment; | 2258 |
| RLG_Tmon_Fatima_B_609E6-1 Triticum monococcum; ; non-autonomous, 3' truncated; | 8846 |
| DTC_Tmon_Jorge_AY188331-2 Triticum monococcum; ; fragment | 1821 |
| RLG_Tmon_Latidu_231A16-1 Triticum monococcum; ; fragment | 2276 |
| RLG_Tmon_Laura_609E6-1 Triticum monococcum; ; complete element, non-autonomous | 12403 |
| RLG_Tmon_Laura_609E6-2 Triticum monococcum; ; 3' fragment of LTR | 1472 |
| RLG_Tmon_Laura_719C13-1 Triticum monococcum; ; complete element | 14250 |
| RLG_Tmon_Sumaya_231A16-2 Triticum monococcum; ; fragment | 4525 |
| DTC_Tmon_TAT2_231A16-1 Triticum monococcum; ; complete element | 4500 |
| RLG_Tmon_Romani_AY188331-1 Triticum monococcum; ; 3' truncated | 5127 |
| RLG_Tmon_WHAM_231A16-1 Triticum monococcum; ; 3' truncated | 8192 |
| RLG_Tmon_WHAM_609E6-1 Triticum monococcum; ; 3' truncated | 8731 |
| DTC_Tmon_Jorge_AY188332-1 Triticum monococcum; ; putative complete element | 211 |
| DTT_Tmon_Fortuna_AF326781-2 Triticum monococcum; ; Stowaway MITE, truncated | 343 |
| DTC_Tmon_Hamlet_AF459088-1 Triticum monococcum; ; SNAC, complete element | 1344 |
| DTC_Tmon_Caspar_AF459088-2 Triticum monococcum; ; complete element | 11707 |
| DTC_Tmon_Caspar_AF459088-3 Triticum monococcum; ; complete element | 11359 |
| RLG_Tmon_Erika_AF459088-1 Triticum monococcum; ; complete element | 14197 |
| RLG_Tmon_Fatima_B_AF459088-1 Triticum monococcum; ; non-autonomous, complete element; | 9906 |
| RLC_Tmon_Ale_AF459088-1 Triticum monococcum; ; complete element | 5050 |
| RLG_Tmon_Jeli_AF459088-1 Triticum monococcum; ; complete element | 12555 |
| RLG_Tmon_Jeli_AF459088-2 Triticum monococcum; ; complete element | 12460 |
| RIX_Tmon_Karin_AF459088-1 Triticum monococcum; ; putative complete element | 6413 |
| RLG_Tmon_Romani_AF459088-1 Triticum monococcum; ; complete element | 10919 |
| RLG_Tmon_Romana_AF459088-2 Triticum monococcum; ; complete element, non-autonomous | 10370 |
| RLG_Tmon_Surya_AF459088-1 Triticum monococcum; ; solo LTR | 4015 |
| RLC_Tmon_TAR1_AF459088-1 Triticum monococcum; ; complete element | 6487 |
| RLC_Tmon_TAR1_AF459088-2 Triticum monococcum; ; 5' truncated | 5499 |
| DTC_Tmon_TAT1_AF459088-1 Triticum monococcum; ; complete element | 14570 |
| DTM_Tmon_Pilifon_AF459088-1 Triticum monococcum; ; WARNING: likely TF gene derived from transposase | 4859 |
| RLG_Tmon_WHAM_AF459088-1 Triticum monococcum; ; complete element | 9604 |
| RLG_Tmon_WHAM_AF459088-2 Triticum monococcum; ; complete element | 9477 |
| DTC_Tmon_Jorge_AF459088-1 Triticum monococcum; ; fragment | 4215 |
| RLG_Tmon_Erika_AF459088-2 Triticum monococcum; ; solo LTR | 4107 |
| RLC_Tmon_WIS_AF459088-1 Triticum monococcum; ; solo LTR | 1714 |
| RLC_Tmon_Liuling_AF459088-1 Triticum monococcum; ; complete element | 4927 |
| DTT_Tmon_Hades_109N23-1 Triticum monococcum; ; Stowaway MITE, fragment | 46 |
| DTT_Tmon_Antonio_109N23-1 Triticum monococcum; ; Stowaway MITE, complete element | 104 |
| RLC_Tmon_Angela_109N23-1 Triticum monococcum; ; fragment | 3415 |
| RLC_Tmon_Angela_109N23-2 Triticum monococcum; ; complete element | 8716 |
| RLG_Tmon_Sabrina_109N23-2 Triticum monococcum; ; solo-LTR | 811 |
| RLC_Tmon_Angela_109N23-3 Triticum monococcum; ; complete element | 8381 |
| DTH_Tmon_Kong_109N23-1 Triticum monococcum; ; fragment | 350 |
| RIX_Tmon_Ramona_109N23-1 Triticum monococcum; ; fragment | 3705 |
| DTT_Tmon_Athos_109N23-1 Triticum monococcum; ; Stowaway MITE, complete element | 80 |
| RLC_Tmon_Ale_109N23-1 Triticum monococcum; ; complete element | 5194 |
| RLC_Tmon_Angela_109N23-4 Triticum monococcum; ; solo-LTR | 1735 |
| DTT_Tmon_SD_109N23-1 Triticum monococcum; ; Stowaway MITE, complete element | 302 |
| DTT_Tmon_Icarus_109N23-1 Triticum monococcum; ; Stowaway MITE, complete element | 103 |
| DTT_Tmon_Athos_AF326781-1 Triticum monococcum; ; Stowaway MITE, complete element | 81 |
| RLC_Tmon_Angela_AF326781-6 Triticum monococcum; ; complete element | 8642 |
| RLC_Tmon_Barbara_AF326781-1 Triticum monococcum; ; 5'fragment | 9832 |
| DTX_Tmon_Belus_AF326781-1 Triticum monococcum; ; putative, complete element | 177 |
| DTM_Tmon_Charon_AF326781-1 Triticum monococcum; ; complete element | 1341 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; complete element | 13276 |
| DTM_Tmon_Deimos_AF326781-1 Triticum monococcum; ; complete element | 2148 |
| DTT_Tmon_Eos_AF326781-1 Triticum monococcum; ; Stowaway MITE, complete element | 354 |
| RLG_Tmon_Erika_AF326781-1 Triticum monococcum; ; complete element | 14146 |
| RLG_Tmon_Fatima_B_AF326781-1 Triticum monococcum; ; non-autonomous, complete element; | 9097 |
| DTT_Tmon_Fortuna_AF326781-1 Triticum monococcum; ; Stowaway MITE, complete element | 316 |
| DTX_Tmon_Gorgon_AF326781-1 Triticum monococcum; ; putative, complete element | 66 |
| RIX_Tmon_Isabelle_AF326781-1 Triticum monococcum; ; complete element | 8408 |
| RSX_Tmon_XC_C_AF326781-1 Triticum monococcum; ; complete element; | 778 |
| RSX_Tmon_XC_C_AF326781-2 Triticum monococcum; ; complete element; | 785 |
| RLC_Tmon_Angela_116F2-1 Triticum monococcum; ; complete element | 8534 |
| RLC_Tmon_Angela_115G1-1 Triticum monococcum; ; fragment of 5' region | 6420 |
| RLC_Tmon_Angela_116F2-2 Triticum monococcum; ; fragment of 5' region | 5943 |
| RLC_Tmon_Angela_116F2-3 Triticum monococcum; ; fragment of 3' region | 2844 |
| RLC_Tmon_Claudia_116F2-1 Triticum monococcum; ; 3' truncated | 7656 |
| RLX_Tmon_Eway_115G1-1 Triticum monococcum; ; complete element | 1986 |
| RLG_Tmon_Fatima_B_116F2-1 Triticum monococcum; ; non-autonomous, fragment of 5' region; | 4304 |
| RLG_Tmon_Latidu_116F2-1 Triticum monococcum; ; 3'fragment | 9806 |
| RLG_Tmon_Latidu_115G1-1 Triticum monococcum; ; fragment of 3' region | 4827 |
| RLX_Tmon_Veju_116F2-1 Triticum monococcum; ; complete element | 2520 |
| RIX_Tmon_Miuse_115G1-1 Triticum monococcum; ; complete element | 7025 |
| RLG_Tmon_Nusif_116F2-1 Triticum monococcum; ; fragment | 7803 |
| RLG_Tmon_Sumaya_116F2-1 Triticum monococcum; ; complete element | 13541 |
| RLG_Tmon_Sabrina_115G1-1 Triticum monococcum; ; complete element | 10255 |
| RLG_Tmon_Sabrina_116F2-1 Triticum monococcum; ; fragment of 3' region | 6129 |
| RLC_Tmon_WIS_116F2-4 Triticum monococcum; ; complete element | 8766 |
| RLG_Tmon_WHAM_115G1-1 Triticum monococcum; ; complete element | 9563 |
| RLG_Tmon_WHAM_115G1-2 Triticum monococcum; ; complete element | 9589 |
| RLG_Tmon_WHAM_116F2-1 Triticum monococcum; ; complete element | 9609 |
| XXX_Tmon_TaiI_AB077254-1 Triticum monococcum; ; tandem repeat, 1 unit | 568 |
| XXX_Tmon_TaiI_AB077255-1 Triticum monococcum; ; tandem repeat, 1 unit | 566 |
| DTC_Tmon_Jorge_AF326781-1 Triticum monococcum; ; complete element | 15800 |
| DTC_Tmon_Jorge_231A16-1 Triticum monococcum; ; complete element | 14727 |
| DTC_Tmon_Balduin_AY146588-1 Triticum monococcum; ; complete element | 9835 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; complete element | 12631 |
| DTC_Tmon_Caspar_AY146588-1 Triticum monococcum; ; complete element | 9907 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; complete element | 12658 |
| DTC_Tmon_Enac_AY146588-2 Triticum monococcum; ; non-autonomous, complete element | 11391 |
| DTC_Tmon_Enac_AY146588-1 Triticum monococcum; ; non-autonomous, complete element | 11355 |
| DTC_Tmon_Mandrake_B_AY146588-1 Triticum monococcum; ; SNAC, complete element; | 892 |
| DTC_Tmon_Hamlet_AY146588-2 Triticum monococcum; ; SNAC, complete element | 1365 |
| RLC_Tmon_Angela_AY146588-1 Triticum monococcum; ; solo-LTR | 1733 |
| RLC_Tmon_Angela_AY146588-2 Triticum monococcum; ; fragment of 5' region | 4394 |
| RLC_Tmon_Angela_AY146588-3 Triticum monococcum; ; fragment of 5' region | 4390 |
| RLC_Tmon_Angela_AY146588-4 Triticum monococcum; ; complete element | 8711 |
| RLC_Tmon_Angela_AY146588-5 Triticum monococcum; ; complete element | 8589 |
| RLC_Tmon_Angela_AY146588-1 Triticum monococcum; ; fragment of 3' region | 5000 |
| DTM_Tmon_Apollo_AY146588-1 Triticum monococcum; ; complete element | 848 |
| RLG_Tmon_Daniela_AY146588-1 Triticum monococcum; ; complete element | 8291 |
| DTC_Tmon_Balduin_AY146588-2 Triticum monococcum; ; fragment of 3' region | 4729 |
| RLG_Tmon_Heidi_AY146588-1 Triticum monococcum; ; solo-LTR | 1576 |
| RIX_Tmon_Karin_AY146588-1 Triticum monococcum; ; fragment of 3' region | 1573 |
| RIX_Tmon_Karin_AY146588-2 Triticum monococcum; ; fragment of 3' region | 536 |
| RIX_Tmon_Karin_AY146588-3 Triticum monococcum; ; fragment of 3' region | 1040 |
| RIX_Tmon_unnamed_AY146588-1 Triticum monococcum; ; fragment of reverse transcriptase | 179 |
| RIX_Tmon_Paula_AY146588-1 Triticum monococcum; ; complete element | 8163 |
| DTM_Tmon_Rhea_AY146588-1 Triticum monococcum; ; complete element | 561 |
| RLG_Tmon_Sabrina_AY146588-1 Triticum monococcum; ; fragment of 3' region | 4723 |
| RLG_Tmon_Sabrina_AY146588-1 Triticum monococcum; ; fragment of 3' region | 4680 |
| RLG_Tmon_Sabrina_AY146588-3 Triticum monococcum; ; 3' truncated | 6831 |
| RLG_Tmon_Sabrina_AY146588-1 Triticum monococcum; ; both ends truncated | 2579 |
| RLG_Tmon_Sabrina_AY146588-2 Triticum monococcum; ; complete element | 7078 |
| DTT_Tmon_Thalos_AY146588-1 Triticum monococcum; ; Stowaway MITE, complete element | 159 |
| DTT_Tmon_Thalos_AY146588-1 Triticum monococcum; ; Stowaway MITE, complete element | 159 |
| RLG_Tmon_WHAM_AY146588-2 Triticum monococcum; ; ends truncated | 7234 |
| RLG_Tmon_WHAM_AY146588-1 Triticum monococcum; ; 5' end truncated | 9586 |
| RLC_Tmon_WIS_AY146588-1 Triticum monococcum; ; complete element | 8738 |
| RLC_Tmon_WIS_AY146588-1 Triticum monococcum; ; solo-LTR | 1739 |
| RLG_Tmon_Wilma_AY146588-1 Triticum monococcum; ; fragment of LTR | 1149 |
| RLG_Tmon_Wilma_AY146588-3 Triticum monococcum; ; complete element | 12881 |
| RLG_Tmon_Wilma_435N11-1 Triticum monococcum; ; fragment of LTR | 1122 |
| XXX_Tmon_XG_AY146588-1 Triticum monococcum; ; NULL | 2214 |
| RIX_Tmon_Yvonne_AY146588-1 Triticum monococcum; ; fragment of 3' region | 4002 |
| DTM_Tmon_Zeus_AY146588-1 Triticum monococcum; ; complete element | 1383 |
| RLC_Tmon_WIS_AF339051-1 Triticum monococcum; ; complete element | 8740 |
| RLC_Tmon_Inga_AF339051-1 Triticum monococcum; ; fragment reverse transcriptase | 952 |
| RLC_Tmon_Ale_AY951944-1 Triticum monococcum; ; fragmented | 3582 |
| RLC_Tmon_Angela_AY951944-1 Triticum monococcum; ; solo-LTR, 400 bp deletion at 1008 | 1808 |
| RLC_Tmon_Angela_AY951944-2 Triticum monococcum; ; truncated LTR | 277 |
| RLC_Tmon_Angela_AY951944-3 Triticum monococcum; ; complete element | 8480 |
| RLC_Tmon_Angela_AY951945-1 Triticum monococcum; ; 5' truncated | 1968 |
| RLC_Tmon_Angela_AY951945-2 Triticum monococcum; ; solo-LTR | 1731 |
| RLC_Tmon_Angela_AY951945-3 Triticum monococcum; ; 5' truncated | 7091 |
| RLC_Tmon_Angela_AY951945-4 Triticum monococcum; ; 5' truncated | 3348 |
| RLC_Tmon_Angela_AY951945-5 Triticum monococcum; ; complete element (recombined) | 10465 |
| DTM_Tmon_Annie_AY951945-1 Triticum monococcum; ; complete element, ESTs CA595997 and TACA712521 | 1091 |
| DTM_Tmon_Gerald_AY485644-1 Triticum monococcum; ; complete element | 327 |
| DTH_Tmon_unnamed_AY914080-1 Triticum monococcum; ; truncated | 1250 |
| DTH_Tmon_Xenon_AY914081-1 Triticum monococcum; ; Tourist MITE, complete element | 304 |
| DTH_Tmon_Kong_AY188331-1 Triticum monococcum; ; complete element | 2086 |
| DTH_Tmon_Kong_DQ767614-1 Triticum monococcum; ; complete element | 2148 |
| DTH_Tmon_Kong_AY914080-1 Triticum monococcum; ; complete element, non-autonomous | 2436 |
| DTH_Tmon_Kong_AY914080-2 Triticum monococcum; ; complete element, non-autonomous | 1818 |
| DTH_Tmon_Rong_AY188332-1 Triticum monococcum; ; complete element, non-autonomous | 1805 |
| DTM_Tmon_Remus_AY914084-1 Triticum monococcum; ; complete element | 843 |
| DTM_Tmon_Remus_DQ767615-1 Triticum monococcum; ; complete element | 828 |
| RLG_Tmon_Sabrina_B_AY146588-2 Triticum monococcum; ; complete element, non-autonomous; | 7078 |
| RLX_Tmon_Artem_AF459088-1 Triticum monococcum; ; complete element | 2506 |
| DTH_Tmon_Xenos_AY146588-1 Triticum monococcum; ; complete element? | 770 |
| DTH_Tmon_Xenos_AY914080-1 Triticum monococcum; ; 5'fragment? | 1770 |
| DTC_Tmon_Pavel_AY188332-1 Triticum monococcum; ; 5'fragment | 5946 |
| DTT_Tmon_SD_109N23-1 Triticum monococcum; ; complete element | 306 |