TREP, the TRansposable Elements Platform
Fasta file for species elements in total_TREP
Sequences: 69
Total size: 385710 bp
Download fasta as text
Download fasta as zip file
| Sequence | Size |
|---|---|
| DTC_Tspe_Donald_consensus-1 Triticeae species; ; consensus sequence | 14374 |
| DTH_Tspe_Kong_consensus-1 Triticeae species; ; consensus sequence | 2119 |
| DTM_Tspe_Remus_consensus-1 Triticeae species; ; consensus sequence | 829 |
| DTT_Tspe_Aison_consensus-1 Triticeae species; ; consensus sequence | 215 |
| DTT_Tspe_Athos_consensus-1 Triticeae species; ; Stowaway MITE, consensus sequence | 81 |
| DTT_Tspe_Icarus_consensus-1 Triticeae species; ; Stowaway MITE, consensus sequence | 108 |
| DTT_Tspe_Pan_consensus-1 Triticeae species; ; Stowaway MITE, consensus sequence | 123 |
| DTT_Tspe_Thalos_consensus-1 Triticeae species; ; Stowaway MITE, consensus sequence | 158 |
| RLC_Tspe_BARE1_A_consensus-1 Triticeae species; ; consensus sequence; | 8627 |
| RLC_Tspe_BARE1_B_consensus-1 Triticeae species; ; consensus sequence; | 8928 |
| RLC_Tspe_BARE1_C_consensus-1 Triticeae species; ; consensus sequence; | 8834 |
| RLC_Tspe_Gisela_consensus-1 Triticeae species; ; consensus sequence | 10088 |
| RLC_Tspe_Maximus_consensus-1 Triticeae species; ; consensus sequence | 14429 |
| RLC_Tspe_WIS_A_consensus-1 Triticeae species; ; consensus sequence; | 8670 |
| RLC_Tspe_WIS_B_consensus-1 Triticeae species; ; consensus sequence; | 8727 |
| RLG_Tspe_BAGY2_consensus-1 Triticeae species; ; consensus sequence | 10270 |
| RLG_Tspe_Carmilla_consensus-1 Triticeae species; ; consensus sequence | 12988 |
| RLG_Tspe_Erika_consensus-1 Triticeae species; ; consensus sequence | 14077 |
| RLG_Tspe_Fatima_consensus-1 Triticeae species; ; consensus sequence | 9997 |
| RLG_Tspe_Fatima_B_consensus-1 Triticeae species; ; consensus sequence, non-autonomous; | 9099 |
| RLG_Tspe_Geneva_consensus-1 Triticeae species; ; consensus sequence | 20112 |
| RLG_Tspe_Laura_consensus-1 Triticeae species; ; consensus sequence | 14059 |
| RLG_Tspe_Sabrina_consensus-1 Triticeae species; ; autonomous element, consensus sequence | 8030 |
| RLG_Tspe_WHAM_consensus-1 Triticeae species; ; consensus sequence | 9445 |
| RLX_Tspe_Artem_consensus-1 Triticeae species; ; consensus sequence | 2546 |
| DTH_Tspe_Xenos_CT009587-1 Triticeae species; ; complete element? | 1879 |
| DTC_Tspe_Balduin_consensus-1 Triticeae species; ; consensus sequence | 11744 |
| DTC_Tspe_Caspar_consensus-1 Triticeae species; ; consensus sequence | 11568 |
| DTC_Tspe_Clifford_consensus-1 Triticeae species; ; consensus sequence | 11318 |
| DTC_Tspe_Conan_consensus-1 Triticeae species; ; consensus sequence | 11735 |
| DTC_Tspe_Hamlet_consensus-1 Triticeae species; ; consensus sequence | 1385 |
| DTC_Tspe_Isaac_consensus-1 Triticeae species; ; consensus sequence | 21226 |
| DTC_Tspe_Sherlock_consensus-1 Triticeae species; ; consensus sequence | 9517 |
| DTC_Tspe_VincentTIR_consensus-1 Triticeae species; ; consensus sequence | 1992 |
| DTH_Tspe_Kerberos_consensus-1 Triticeae species; ; consensus sequence | 285 |
| DTH_Tspe_Orpheus_AC200842-1 Triticeae species; ; complete element | 278 |
| DTH_Tspe_Orpheus_consensus-1 Triticeae species; ; Tourist MITE, consensus sequence | 272 |
| DTM_Tspe_Pilifon_AY485644-1 Triticeae species; ; WARNING: likely TF gene derived from transposase | 4869 |
| DTT_Tspe_Fortuna_consensus-1 Triticeae species; ; Stowaway MITE, consensus sequence | 353 |
| DTT_Tspe_Oleus_consensus-1 Triticeae species; ; consensus sequence | 150 |
| DTT_Tspe_Polyphemus_consensus-1 Triticeae species; ; consensus sequence | 241 |
| DTT_Tspe_Stolos_consensus-1 Triticeae species; ; consensus sequence | 259 |
| RIX_Tspe_Karin_consensus-1 Triticeae species; ; consensus sequence | 7904 |
| RLC_Tspe_Ale_consensus-1 Triticeae species; ; consensus sequence | 5028 |
| RLC_Tspe_Barbara_consensus-1 Triticeae species; ; consensus sequence | 9904 |
| RLG_Tspe_Danae_consensus-1 Triticeae species; ; consensus sequence | 11262 |
| RLG_Tspe_Jeli_consensus-1 Triticeae species; ; consensus sequence | 12268 |
| RLG_Tspe_Sumana_consensus-1 Triticeae species; ; consensus sequence | 11900 |
| DTM_Tspe_Vacuna_AM884195-1 Triticeae species; ; complete element | 464 |
| DTM_Tspe_Vacuna_AM884196-1 Triticeae species; ; complete element | 466 |
| DTM_Tspe_Vacuna_CT009588-1 Triticeae species; ; complete element | 466 |
| DTC_Tspe_Cameron_DQ885753-1 Triticeae species; ; complete element | 1218 |
| DTH_Tspe_Victor_DQ885757-1 Triticeae species; ; complete element | 276 |
| DTM_Tspe_Vacuna_consensus-1 Triticeae species; ; complete element | 464 |
| DTT_Tspe_Mercia_DQ885768-1 Triticeae species; ; complete element, putative Stowaway Mother element | 4823 |
| DTT_Tspe_Minimus_DQ885757-1 Triticeae species; ; complete element | 55 |
| RIX_Tspe_unnamed_DQ885757-1 Triticeae species; ; 3'fragment | 3444 |
| RLC_Tspe_Sasanda_EU157184-1 Triticeae species; ; complete element | 6433 |
| RLX_Tspe_Cassandra_AF538603-1 Triticeae species; ; complete element | 732 |
| RLX_Tspe_Cassandra_AF538604-1 Triticeae species; ; complete element | 810 |
| RLX_Tspe_Cassandra_AF538605-1 Triticeae species; ; complete element | 722 |
| RLX_Tspe_Cassandra_AF538606-1 Triticeae species; ; complete element | 737 |
| RLX_Tspe_Cassandra_AF538607-1 Triticeae species; ; complete element | 733 |
| RLX_Tspe_Cassandra_AF538608-1 Triticeae species; ; complete element | 732 |
| RLX_Tspe_Cassandra_AF538609-1 Triticeae species; ; complete element | 734 |
| RLX_Tspe_Cassandra_consensus-1 Triticeae species; ; consensus sequence | 734 |
| DTT_Tspe_Hades_consensus-1 Triticeae species; ; Stowaway MITE, consensus sequence | 96 |
| RLC_Tspe_Angela_A_consensus-1 Triticeae species; ; consensus sequence; | 8724 |
| RLC_Tspe_Angela_B_consensus-1 Triticeae species; ; consensus sequence; | 8577 |