TREP, the TRansposable Elements Platform
Fasta file for glaberrima elements in total_TREP
Sequences: 94
Total size: 121673 bp
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| Sequence | Size |
|---|---|
| DTT_Ogla_SA_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 241 |
| DTT_Ogla_SAA_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 244 |
| DTT_Ogla_SAB_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 108 |
| DTT_Ogla_SAC_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 149 |
| DTT_Ogla_SB_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 194 |
| DTT_Ogla_SC_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 296 |
| DTT_Ogla_SD_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 264 |
| DTT_Ogla_SE_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 263 |
| DTT_Ogla_SG_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 239 |
| DTT_Ogla_SH_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 239 |
| DTT_Ogla_SI_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 240 |
| DTT_Ogla_SJ_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 242 |
| DTT_Ogla_SK_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 265 |
| DTT_Ogla_SM_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 261 |
| DTT_Ogla_SN_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 263 |
| DTT_Ogla_SQ_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 317 |
| DTT_Ogla_SR_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 103 |
| DTT_Ogla_SS_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 261 |
| DTT_Ogla_ST_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 148 |
| DTT_Ogla_SU_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 255 |
| DTT_Ogla_SV_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 110 |
| DTT_Ogla_SW_consensus-1 Oryza glaberrima; ; Stowaway MITE, consensus | 232 |
| DTC_Ogla_Storm_NA_consensus-1 Oryza glaberrima; ; consensus sequence | 796 |
| DTH_Ogla_Baba_c3p9479789-1 Oryza glaberrima; ; complete element | 3986 |
| DTH_Ogla_Blip_A_rnd-1 Oryza glaberrima; ; complete element | 5319 |
| DTM_Ogla_HA_consensus-1 Oryza glaberrima; ; consensus sequence | 476 |
| DTH_Ogla_TA_consensus-1 Oryza glaberrima; ; consensus sequence | 286 |
| DTH_Ogla_TAA_consensus-1 Oryza glaberrima; ; consensus sequence | 279 |
| DTH_Ogla_TAB_consensus-1 Oryza glaberrima; ; consensus sequence | 272 |
| DTH_Ogla_TB_consensus-1 Oryza glaberrima; ; consensus sequence | 138 |
| DTH_Ogla_TC_consensus-1 Oryza glaberrima; ; consensus sequence | 356 |
| DTH_Ogla_TD_consensus-1 Oryza glaberrima; ; consensus sequence | 139 |
| DTH_Ogla_TE_consensus-1 Oryza glaberrima; ; consensus sequence | 310 |
| DTH_Ogla_TF_consensus-1 Oryza glaberrima; ; consensus sequence | 345 |
| DTH_Ogla_TG_consensus-1 Oryza glaberrima; ; consensus sequence | 219 |
| DTH_Ogla_TI_c3p35273406-1 Oryza glaberrima; ; complete element | 106 |
| DTH_Ogla_TO_consensus-1 Oryza glaberrima; ; consensus sequence | 244 |
| DTH_Ogla_TR_consensus-1 Oryza glaberrima; ; consensus sequence | 263 |
| DTH_Ogla_TS_consensus-1 Oryza glaberrima; ; consensus sequence | 353 |
| DTH_Ogla_TT_c3p22775290-1 Oryza glaberrima; ; complete element | 844 |
| DTH_Ogla_TU_c3p34843439-1 Oryza glaberrima; ; complete element | 530 |
| DTH_Ogla_TV_consensus-1 Oryza glaberrima; ; consensus sequence | 316 |
| DTH_Ogla_TW_consensus-1 Oryza glaberrima; ; consensus sequence | 306 |
| DTM_Ogla_TX_consensus-1 Oryza glaberrima; ; consensus sequence | 376 |
| DTH_Ogla_TY_consensus-1 Oryza glaberrima; ; consensus sequence | 850 |
| DTH_Ogla_TZ_c3p2332487-1 Oryza glaberrima; ; complete element | 552 |
| DTM_Ogla_MA_consensus-1 Oryza glaberrima; ; consensus sequence | 382 |
| DTM_Ogla_MB_consensus-1 Oryza glaberrima; ; consensus sequence | 685 |
| DTM_Ogla_MC_consensus-1 Oryza glaberrima; ; consensus sequence | 745 |
| DTM_Ogla_MD_consensus-1 Oryza glaberrima; ; consensus sequence | 392 |
| DTM_Ogla_ME_c3p3617225-1 Oryza glaberrima; ; complete element | 395 |
| DTM_Ogla_MF_c3p8330373-1 Oryza glaberrima; ; complete element | 683 |
| DTM_Ogla_MG_c3p34592809-1 Oryza glaberrima; ; complete element | 3841 |
| DTM_Ogla_MH_c3p10435072-1 Oryza glaberrima; ; complete element | 556 |
| DTA_Ogla_MI_consensus-1 Oryza glaberrima; ; consensus sequence | 188 |
| DTM_Ogla_MJ_c3p5531207-1 Oryza glaberrima; ; complete element | 174 |
| DTM_Ogla_MK_NA_consensus-2 Oryza glaberrima; ; consensus sequence | 685 |
| DTT_Ogla_SX_consensus-1 Oryza glaberrima; ; consensus sequence | 216 |
| RLC_Ogla_Owis_consensus-1 Oryza glaberrima; ; consensus sequence | 4663 |
| RLX_Ogla_Dahlia_consensus-1 Oryza glaberrima; ; consensus sequence | 1594 |
| RLX_Ogla_RAA_consensus-1 Oryza glaberrima; ; consensus sequence | 250 |
| RSX_Ogla_Cleo_consensus-1 Oryza glaberrima; ; consensus sequence | 206 |
| DTA_Ogla_HA_c9p20275907-1 Oryza glaberrima; ; complete element | 589 |
| DTH_Ogla_TAS_RND-1 Oryza glaberrima; ; complete element | 817 |
| DTH_Ogla_TAU_RND-1 Oryza glaberrima; ; complete element | 283 |
| DTH_Ogla_XAB_RND-1 Oryza glaberrima; ; complete element | 245 |
| DTA_Ogla_MI_NA_RND-1 Oryza glaberrima; ; complete element | 187 |
| DTA_Ogla_HL_RND-1 Oryza glaberrima; ; complete element | 803 |
| DTC_Ogla_Ted_Os02g44810-1 Oryza glaberrima; ; complete element | 8679 |
| DTC_Ogla_Benny_Os1-1 Oryza glaberrima; ; complete element | 1506 |
| DTH_Ogla_TB_RND-1 Oryza glaberrima; ; complete element | 343 |
| DTM_Ogla_MAG_Os1-1 Oryza glaberrima; ; complete element | 4732 |
| DTM_Ogla_MAH_Os1-1 Oryza glaberrima; ; complete element | 4422 |
| DTM_Ogla_MAH_Os1-2 Oryza glaberrima; ; complete element | 5111 |
| DTM_Ogla_MAI_Os4-1 Oryza glaberrima; ; complete element | 1874 |
| DTM_Ogla_MAI_Os4-2 Oryza glaberrima; ; complete element | 1595 |
| NULL_Ogla_NULL_consensus-1 Oryza glaberrima; ; complete element | 6028 |
| NULL_Ogla_NULL_consensus-1 Oryza glaberrima; ; complete element | 1203 |
| NULL_Ogla_NULL_consensus-1 Oryza glaberrima; ; complete element | 1735 |
| RIL_Ogla_Cholla_RND-1 Oryza glaberrima; ; fragment | 2778 |
| RIL_Ogla_Creosote_RND-1 Oryza glaberrima; ; fragment | 3700 |
| RIL_Ogla_Ocotillo_RND-1 Oryza glaberrima; ; fragment | 2533 |
| RIL_Ogla_Yucca_RND-1 Oryza glaberrima; ; fragment | 2190 |
| RLC_Ogla_Sandy_RND-1 Oryza glaberrima; ; complete element | 12840 |
| RLX_Ogla_RAK_consensus-1 Oryza glaberrima; ; consensus sequence | 3154 |
| XXX_Ogla_XAC_consensus-1 Oryza glaberrima; ; consensus sequence | 760 |
| XXX_Ogla_XAD_consensus-1 Oryza glaberrima; ; consensus sequence | 681 |
| DTA_Ogla_MI_consensus-2 Oryza glaberrima; ; consensus sequence | 186 |
| XXX_Ogla_Hypo_Og1-1 Oryza glaberrima; ; complete element | 2359 |
| XXX_Ogla_Hypo_Og1-2 Oryza glaberrima; ; complete element | 2361 |
| XXX_Ogla_Hypo_Og3-1 Oryza glaberrima; ; complete element | 2343 |
| XXX_Ogla_Hypo_Og4-1 Oryza glaberrima; ; complete element | 2679 |
| XXX_Ogla_Hypo_Og8-1 Oryza glaberrima; ; complete element | 2348 |
| NULL_Ogla_NULL_consensus-1 Oryza glaberrima; ; complete element | 2359 |