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TREP, the TRansposable Elements Platform

Fasta file for Brachypodium elements in total_TREP

Sequences: 233
Total size: 1054875 bp

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SequenceSize
RLC_Bdis_BdisC006_consensus-1 Brachypodium distachyon; ; consensus sequence5407
RLC_Bdis_BdisC008_consensus-1 Brachypodium distachyon; ; consensus sequence5170
RLC_Bdis_BdisC010_consensus-1 Brachypodium distachyon; ; consensus sequence5894
RLC_Bdis_BdisC022_consensus-1 Brachypodium distachyon; ; consensus sequence8676
RLC_Bdis_BdisC024_consensus-1 Brachypodium distachyon; ; consensus sequence7917
RLC_Bdis_BdisC026_consensus-1 Brachypodium distachyon; ; consensus sequence9276
RLC_Bdis_BdisC030_consensus-1 Brachypodium distachyon; ; consensus sequence7955
RLC_Bdis_BdisC031_consensus-1 Brachypodium distachyon; ; consensus sequence4846
RLC_Bdis_BdisC048_consensus-1 Brachypodium distachyon; ; consensus sequence6487
RLC_Bdis_BdisC053_consensus-1 Brachypodium distachyon; ; consensus sequence5350
RLC_Bdis_BdisC088_consensus-1 Brachypodium distachyon; ; consensus sequence5161
RLC_Bdis_BdisC090_consensus-1 Brachypodium distachyon; ; consensus sequence5200
RLC_Bdis_BdisC092_consensus-1 Brachypodium distachyon; ; consensus sequence5254
RLC_Bdis_BdisC099_consensus-1 Brachypodium distachyon; ; consensus sequence4796
RLC_Bdis_BdisC130_consensus-1 Brachypodium distachyon; ; consensus sequence6447
RLC_Bdis_BdisC197_consensus-1 Brachypodium distachyon; ; consensus sequence5239
RLC_Bdis_BdisC198_consensus-1 Brachypodium distachyon; ; consensus sequence5210
RLC_Bdis_BdisC209_consensus-1 Brachypodium distachyon; ; consensus sequence7940
RLC_Bdis_BdisC242_consensus-1 Brachypodium distachyon; ; consensus sequence5347
RLC_Bdis_BdisC254_consensus-1 Brachypodium distachyon; ; consensus sequence4915
RLC_Bdis_BdisC294_consensus-1 Brachypodium distachyon; ; consensus sequence6219
RLG_Bdis_BdisC000_consensus-1 Brachypodium distachyon; ; consensus sequence13500
RLG_Bdis_BdisC004_consensus-1 Brachypodium distachyon; ; consensus sequence10264
RLG_Bdis_BdisC009_consensus-1 Brachypodium distachyon; ; consensus sequence13537
RLG_Bdis_BdisC011_consensus-1 Brachypodium distachyon; ; consensus sequence14104
RLG_Bdis_BdisC012_consensus-1 Brachypodium distachyon; ; consensus sequence13235
RLG_Bdis_BdisC014_consensus-1 Brachypodium distachyon; ; consensus sequence12887
RLG_Bdis_BdisC021_consensus-1 Brachypodium distachyon; ; consensus sequence8174
RLG_Bdis_BdisC037_consensus-1 Brachypodium distachyon; ; consensus sequence15485
RLG_Bdis_BdisC039_consensus-1 Brachypodium distachyon; ; consensus sequence8274
RLG_Bdis_BdisC061_consensus-1 Brachypodium distachyon; ; consensus sequence13690
RLG_Bdis_BdisC072_consensus-1 Brachypodium distachyon; ; consensus sequence14246
RLG_Bdis_BdisC077_consensus-1 Brachypodium distachyon; ; consensus sequence7791
RLG_Bdis_BdisC078_consensus-1 Brachypodium distachyon; ; consensus sequence5192
RLG_Bdis_BdisC102_consensus-1 Brachypodium distachyon; ; consensus sequence8332
RLG_Bdis_BdisC180_consensus-1 Brachypodium distachyon; ; consensus sequence13250
RLG_Bdis_BdisC249_consensus-1 Brachypodium distachyon; ; consensus sequence13155
RLG_Bdis_BdisC265_consensus-1 Brachypodium distachyon; ; consensus sequence7766
RLG_Bdis_BdisC266_consensus-1 Brachypodium distachyon; ; consensus sequence13197
RLX_Bdis_BdisC011_consensus-1 Brachypodium distachyon; ; consensus sequence11189
RLX_Bdis_BdisC012_consensus-1 Brachypodium distachyon; ; consensus sequence8182
RLX_Bdis_BdisC026_consensus-1 Brachypodium distachyon; ; consensus sequence6942
RLX_Bdis_BdisC038_consensus-1 Brachypodium distachyon; ; consensus sequence11405
RLG_Bdis_BdisC152_B_consensus-1 Brachypodium distachyon; ; consensus sequence;5284
DTT_Bdis_BdisStowawayA_consensus-1 Brachypodium distachyon; ; consensus sequence117
DTT_Bdis_BdisStowawayB_consensus-1 Brachypodium distachyon; ; consensus sequence211
DTT_Bdis_BdisStowawayC_consensus-1 Brachypodium distachyon; ; consensus sequence86
DTT_Bdis_BdisStowawayD_consensus-1 Brachypodium distachyon; ; consensus sequence219
DTT_Bdis_BdisStowawayE_consensus-1 Brachypodium distachyon; ; consensus sequence117
DTT_Bdis_BdisStowawayF_consensus-1 Brachypodium distachyon; ; consensus sequence97
DTT_Bdis_BdisStowawayG_consensus-1 Brachypodium distachyon; ; consensus sequence245
DTT_Bdis_BdisStowawayH_consensus-1 Brachypodium distachyon; ; consensus sequence117
DTT_Bdis_BdisStowawayI_consensus-1 Brachypodium distachyon; ; consensus sequence128
DTT_Bdis_BdisStowawayJ_consensus-1 Brachypodium distachyon; ; consensus sequence117
DTT_Bdis_BdisStowawayK_consensus-1 Brachypodium distachyon; ; consensus sequence256
DTT_Bdis_BdisStowawayL_consensus-1 Brachypodium distachyon; ; consensus sequence117
DTT_Bdis_BdisStowawayM_consensus-1 Brachypodium distachyon; ; consensus sequence117
DTT_Bdis_BdisStowawayN_consensus-1 Brachypodium distachyon; ; consensus sequence241
DTT_Bdis_BdisStowawayO_consensus-1 Brachypodium distachyon; ; consensus sequence245
DTT_Bdis_BdisStowawayP_consensus-1 Brachypodium distachyon; ; consensus sequence118
DTT_Bdis_BdisStowawayQ_consensus-1 Brachypodium distachyon; ; consensus sequence102
DTT_Bdis_BdisStowawayR_consensus-1 Brachypodium distachyon; ; consensus sequence86
DTT_Bdis_BdisStowawayS_consensus-1 Brachypodium distachyon; ; consensus sequence98
DTT_Bdis_BdisStowawayT_consensus-1 Brachypodium distachyon; ; consensus sequence86
DTT_Bdis_BdisStowawayU_consensus-1 Brachypodium distachyon; ; consensus sequence241
DTC_Bdis_BdisA_consensus-1 Brachypodium distachyon; ; consensus sequence, 9413
DTC_Bdis_BdisB_consensus-1 Brachypodium distachyon; ; consensus sequence11807
DTC_Bdis_BdisC_consensus-1 Brachypodium distachyon; ; consensus sequence9711
DTC_Bdis_BdisD_consensus-1 Brachypodium distachyon; ; consensus sequence10442
DTC_Bdis_BdisE_consensus-1 Brachypodium distachyon; ; consensus sequence11787
DTC_Bdis_BdisF_consensus-1 Brachypodium distachyon; ; consensus sequence11681
DTC_Bdis_BdisG_consensus-1 Brachypodium distachyon; ; consensus sequence10049
DTC_Bdis_BdisH_consensus-1 Brachypodium distachyon; ; consensus sequence13655
DTC_Bdis_BdisI_consensus-1 Brachypodium distachyon; ; consensus sequence11656
DTC_Bdis_BdisJ_consensus-1 Brachypodium distachyon; ; consensus sequence12226
DTC_Bdis_BdisK_consensus-1 Brachypodium distachyon; ; consensus sequence12436
DTC_Bdis_BdisL_consensus-1 Brachypodium distachyon; ; consensus sequence796
DTC_Bdis_BdisM_consensus-1 Brachypodium distachyon; ; consensus sequence2654
DTC_Bdis_BdisN_consensus-1 Brachypodium distachyon; ; consensus sequence6115
DTT_Bdis_BdisA_Bd1-110 Brachypodium distachyon; ; complete element, autonomous element4216
DTT_Bdis_BdisA_Bd4-106 Brachypodium distachyon; ; complete element2850
DTT_Bdis_BdisB_Bd1-106 Brachypodium distachyon; ; complete element4586
DTT_Bdis_BdisB_Bd2-109 Brachypodium distachyon; ; complete element5594
DTT_Bdis_BdisB_Bd3-107 Brachypodium distachyon; ; complete element4767
DTT_Bdis_BdisC_Bd2-106 Brachypodium distachyon; ; complete element5731
DTT_Bdis_BdisC_Bd2-110 Brachypodium distachyon; ; complete element4986
DTT_Bdis_BdisC_Bd2-110 Brachypodium distachyon; ; complete element, autonomous element4986
DTT_Bdis_BdisC_Bd3-111 Brachypodium distachyon; ; complete element3845
DTT_Bdis_BdisC_Bd4-112 Brachypodium distachyon; ; complete element4165
DTT_Bdis_BdisD_Bd3-102 Brachypodium distachyon; ; complete element6162
DTT_Bdis_BdisD_Bd5-102 Brachypodium distachyon; ; complete element3873
DTT_Bdis_BdisE_Bd1-109 Brachypodium distachyon; ; complete element, autonomous element4966
DTT_Bdis_BdisE_Bd3-103 Brachypodium distachyon; ; complete element5048
DTT_Bdis_BdisE_Bd4-110 Brachypodium distachyon; ; complete element4766
DTT_Bdis_BdisE_Bd4-111 Brachypodium distachyon; ; complete element4948
DTT_Bdis_BdisE_Bd5-101 Brachypodium distachyon; ; complete element5618
DTT_Bdis_BdisF_Bd2-101 Brachypodium distachyon; ; complete element4326
DTT_Bdis_BdisF_Bd4-102 Brachypodium distachyon; ; complete element4483
DTT_Bdis_BdisF_Bd4-105 Brachypodium distachyon; ; complete element, autonomous element4563
DTT_Bdis_BdisF_Bd5-104 Brachypodium distachyon; ; complete element4477
DTT_Bdis_BdisG_Bd3-117 Brachypodium distachyon; ; complete element, autonomous element3943
DTT_Bdis_BdisG_Bd4-101 Brachypodium distachyon; ; complete element, autonomous element3960
DTT_Bdis_BdisH_Bd1-108 Brachypodium distachyon; ; complete element4561
DTT_Bdis_BdisH_Bd3-112 Brachypodium distachyon; ; complete element3659
DTT_Bdis_BdisI_Bd3-115 Brachypodium distachyon; ; complete element3900
DTH_Bdis_BdisA_consensus-1 Brachypodium distachyon; ; consensus sequence, 3977
DTH_Bdis_BdisAB_RND-1 Brachypodium distachyon; ; complete element, autonomous element3600
DTH_Bdis_BdisAC_RND-1 Brachypodium distachyon; ; complete element, autonomous element4088
DTH_Bdis_BdisB_consensus-1 Brachypodium distachyon; ; consensus sequence, 2013
DTH_Bdis_BdisC_consensus-1 Brachypodium distachyon; ; consensus sequence, 1972
DTH_Bdis_BdisD_consensus-1 Brachypodium distachyon; ; consensus sequence, 5050
DTH_Bdis_BdisE_consensus-1 Brachypodium distachyon; ; consensus sequence, 2298
DTH_Bdis_BdisF_consensus-1 Brachypodium distachyon; ; consensus sequence, 750
DTH_Bdis_BdisH_consensus-1 Brachypodium distachyon; ; consensus sequence, 2402
DTH_Bdis_BdisH_NA_consensus-1 Brachypodium distachyon; ; consensus sequence, 684
DTH_Bdis_BdisI_consensus-1 Brachypodium distachyon; ; consensus sequence, 4333
DTH_Bdis_BdisJ_Bd4-4 Brachypodium distachyon; ; fragment, autonomous element3890
DTH_Bdis_BdisJ_RND-1 Brachypodium distachyon; ; fragment2994
DTH_Bdis_BdisN_RND-1 Brachypodium distachyon; ; fragment1942
DTH_Bdis_BdisO_consensus-1 Brachypodium distachyon; ; consensus sequence, 5750
DTH_Bdis_BdisP_consensus-1 Brachypodium distachyon; ; consensus sequence, 4586
DTH_Bdis_BdisQ_consensus-1 Brachypodium distachyon; ; consensus sequence, 4252
DTH_Bdis_BdisS_consensus-1 Brachypodium distachyon; ; consensus sequence, 4456
DTH_Bdis_BdisT_consensus-1 Brachypodium distachyon; ; consensus sequence, 3679
DTH_Bdis_BdisV_RND-1 Brachypodium distachyon; ; fragment1450
DTH_Bdis_BdisW_consensus-1 Brachypodium distachyon; ; consensus sequence, 3643
DTH_Bdis_BdisX_consensus-1 Brachypodium distachyon; ; consensus sequence, 3894
DTH_Bdis_BdisY_B_consensus-1 Brachypodium distachyon; ; consensus sequence, , subfamily B;1077
DTH_Bdis_BdisY_consensus-1 Brachypodium distachyon; ; consensus sequence, 3840
DTH_Bdis_BdisZ0022_consensus-1 Brachypodium distachyon; ; consensus sequence, 1093
DTH_Bdis_BdisTouristA_consensus-1 Brachypodium distachyon; ; consensus sequence, 285
DTH_Bdis_BdisTouristB_consensus-1 Brachypodium distachyon; ; consensus sequence, 350
DTH_Bdis_BdisTouristC_consensus-1 Brachypodium distachyon; ; consensus sequence, 194
DTH_Bdis_BdisTouristD_consensus-1 Brachypodium distachyon; ; consensus sequence, 346
DTH_Bdis_BdisTouristE_consensus-1 Brachypodium distachyon; ; consensus sequence, 336
DTH_Bdis_BdisTouristF_consensus-1 Brachypodium distachyon; ; consensus sequence, 253
DTH_Bdis_BdisTouristG_consensus-1 Brachypodium distachyon; ; consensus sequence, 272
DTH_Bdis_BdisTouristH_consensus-1 Brachypodium distachyon; ; consensus sequence, 374
DTH_Bdis_BdisTouristI_consensus-1 Brachypodium distachyon; ; consensus sequence, 316
DTH_Bdis_BdisTouristJ_consensus-1 Brachypodium distachyon; ; consensus sequence, 239
DTH_Bdis_BdisTouristK_consensus-1 Brachypodium distachyon; ; consensus sequence, 230
DTH_Bdis_BdisTouristL_consensus-1 Brachypodium distachyon; ; consensus sequence, 258
DTH_Bdis_BdisTouristM_consensus-1 Brachypodium distachyon; ; consensus sequence, 266
DTH_Bdis_BdisTouristN_consensus-1 Brachypodium distachyon; ; consensus sequence, 387
DTH_Bdis_BdisTouristO_consensus-1 Brachypodium distachyon; ; consensus sequence, 405
DTH_Bdis_BdisTouristP_consensus-1 Brachypodium distachyon; ; consensus sequence, 220
DTH_Bdis_BdisTouristQ_consensus-1 Brachypodium distachyon; ; consensus sequence, 363
DTH_Bdis_BdisTouristR_consensus-1 Brachypodium distachyon; ; consensus sequence, 220
DTH_Bdis_BdisTouristS_consensus-1 Brachypodium distachyon; ; consensus sequence, 273
DTM_Bdis_BdisEba_RND-1 Brachypodium distachyon; ; complete element686
DTM_Bdis_BdisEbe_RND-1 Brachypodium distachyon; ; complete element426
DTM_Bdis_BdisEbi_RND-1 Brachypodium distachyon; ; complete element489
DTM_Bdis_BdisEbo_RND-1 Brachypodium distachyon; ; complete element458
DTM_Bdis_BdisEbu_RND-1 Brachypodium distachyon; ; complete element528
DTM_Bdis_BdisEca_RND-1 Brachypodium distachyon; ; complete element468
DTM_Bdis_BdisEce_RND-1 Brachypodium distachyon; ; complete element548
DTM_Bdis_BdisEci_RND-1 Brachypodium distachyon; ; complete element600
DTM_Bdis_BdisEco_RND-1 Brachypodium distachyon; ; complete element450
DTM_Bdis_BdisEcu_RND-1 Brachypodium distachyon; ; complete element729
DTM_Bdis_BdisEda_RND-1 Brachypodium distachyon; ; complete element8952
DTM_Bdis_BdisEde_RND-1 Brachypodium distachyon; ; complete element142
DTM_Bdis_BdisEdi_RND-1 Brachypodium distachyon; ; complete element435
DTM_Bdis_BdisEdo_RND-1 Brachypodium distachyon; ; complete element509
DTM_Bdis_BdisEdu_RND-1 Brachypodium distachyon; ; complete element154
DTM_Bdis_BdisEfa_RND-1 Brachypodium distachyon; ; complete element490
DTM_Bdis_BdisEfe_RND-1 Brachypodium distachyon; ; complete element855
DTM_Bdis_BdisEfi_RND-1 Brachypodium distachyon; ; complete element110
DTM_Bdis_BdisEfo_RND-1 Brachypodium distachyon; ; complete element608
DTM_Bdis_BdisEfu_RND-1 Brachypodium distachyon; ; complete element354
DTM_Bdis_BdisEga_RND-1 Brachypodium distachyon; ; complete element746
DTM_Bdis_BdisEge_RND-1 Brachypodium distachyon; ; complete element315
DTM_Bdis_BdisEgi_RND-1 Brachypodium distachyon; ; complete element219
DTM_Bdis_BdisEgo_RND-1 Brachypodium distachyon; ; complete element219
DTM_Bdis_BdisEgu_RND-1 Brachypodium distachyon; ; complete element342
DTM_Bdis_BdisEha_RND-1 Brachypodium distachyon; ; complete element596
DTM_Bdis_BdisEhe_RND-1 Brachypodium distachyon; ; complete element353
DTM_Bdis_BdisEhi_RND-1 Brachypodium distachyon; ; complete element274
DTM_Bdis_BdisEho_RND-1 Brachypodium distachyon; ; complete element618
DTM_Bdis_BdisEhu_RND-1 Brachypodium distachyon; ; complete element402
DTM_Bdis_BdisEka_RND-1 Brachypodium distachyon; ; complete element3550
DTM_Bdis_BdisEke_RND-1 Brachypodium distachyon; ; complete element108
DTM_Bdis_BdisEki_RND-1 Brachypodium distachyon; ; complete element13858
DTM_Bdis_BdisEko_RND-1 Brachypodium distachyon; ; complete element124
DTM_Bdis_BdisEku_RND-1 Brachypodium distachyon; ; complete element84
DTM_Bdis_BdisEla_RND-1 Brachypodium distachyon; ; complete element502
DTM_Bdis_BdisEle_RND-1 Brachypodium distachyon; ; complete element8483
DTM_Bdis_BdisEli_RND-1 Brachypodium distachyon; ; complete element667
DTM_Bdis_BdisElo_RND-1 Brachypodium distachyon; ; complete element4391
DTM_Bdis_BdisEma_RND-1 Brachypodium distachyon; ; complete element510
DTM_Bdis_BdisEme_RND-1 Brachypodium distachyon; ; complete element4634
DTM_Bdis_BdisEmi_RND-1 Brachypodium distachyon; ; complete element5728
DTM_Bdis_BdisEmo_RND-1 Brachypodium distachyon; ; complete element13156
DTM_Bdis_BdisEmu_RND-1 Brachypodium distachyon; ; complete element5237
DTM_Bdis_BdisEna_RND-1 Brachypodium distachyon; ; complete element8181
DTM_Bdis_BdisEne_RND-1 Brachypodium distachyon; ; complete element854
DTM_Bdis_BdisEni_RND-1 Brachypodium distachyon; ; complete element847
DTM_Bdis_BdisEno_RND-1 Brachypodium distachyon; ; complete element803
DTM_Bdis_BdisEnu_RND-1 Brachypodium distachyon; ; complete element620
DTM_Bdis_BdisEpa_RND-1 Brachypodium distachyon; ; complete element5656
DTM_Bdis_BdisEpe_RND-1 Brachypodium distachyon; ; complete element5427
DTM_Bdis_BdisEpi_RND-1 Brachypodium distachyon; ; complete element8416
DTM_Bdis_BdisEpo_Bd2-6 Brachypodium distachyon; ; complete element1037
DTM_Bdis_BdisEpo_Bd2-7 Brachypodium distachyon; ; complete element1037
DTM_Bdis_BdisEqua_Bd1-10 Brachypodium distachyon; ; complete element426
DTM_Bdis_BdisEque_Bd2-9 Brachypodium distachyon; ; complete element529
DTM_Bdis_BdisEqui_Bd3-105 Brachypodium distachyon; ; complete element1076
DTM_Bdis_BdisEquo_Bd5-3 Brachypodium distachyon; ; complete element892
DTM_Bdis_BdisEquu_Bd5-3 Brachypodium distachyon; ; complete element447
DTM_Bdis_BdisEra_RND-1 Brachypodium distachyon; ; complete element236
DTM_Bdis_BdisEre_RND-1 Brachypodium distachyon; ; complete element1485
DHH_Bdis_BdisA_consensus-1 Brachypodium distachyon; ; consensus sequence, 6798
DHH_Bdis_BdisB_Bd1-18 Brachypodium distachyon; ; complete element13083
DHH_Bdis_BdisB_Bd1-3 Brachypodium distachyon; ; complete element3297
DHH_Bdis_BdisB_Bd1-4 Brachypodium distachyon; ; complete element4184
DHH_Bdis_BdisB_Bd3-11 Brachypodium distachyon; ; complete element13069
DHH_Bdis_AA_Bd1-13 Brachypodium distachyon; ; complete element13800
DHH_Bdis_AA_Bd1-3 Brachypodium distachyon; ; complete element12627
DHH_Bdis_AA_Bd3-9 Brachypodium distachyon; ; complete element8359
DHH_Bdis_AA_Bd4-5 Brachypodium distachyon; ; complete element8467
RLG_Bdis_BdisC152_Bd2-2 Brachypodium distachyon; ; complete element, autonomous element8272
RLG_Bdis_BdisC152_Bd2-3 Brachypodium distachyon; ; complete element, autonomous element8276
RIR_Bdis_BdisA_RND-1 Brachypodium distachyon; ; fragment2634
DHH_Bdis_BC_RND-8 Brachypodium distachyon; ; fragment10451
DTM_Bdis_Farawake_RND-10 Brachypodium distachyon; ; complete element13751
DTM_Bdis_Farawake_RND-11 Brachypodium distachyon; ; complete element14211
DHH_Bdis_AA_RND-12 Brachypodium distachyon; ; fragment10222
DHH_Bdis_AA_RND-1 Brachypodium distachyon; ; fragment11358
DHH_Bdis_AB_RND-1 Brachypodium distachyon; ; fragment11451
DTM_Bdis_Farawake_RND-15 Brachypodium distachyon; ; 5'fragment10023
DTM_Bdis_Farawake_RND-17 Brachypodium distachyon; ; 5'fragment6013
DTM_Bdis_Farawake_RND-24 Brachypodium distachyon; ; complete element12497
DTM_Bdis_Farawake_RND-4 Brachypodium distachyon; ; complete element4610
RLC_Bdis_BdisC022_consensus-2 Brachypodium distachyon; ; consensus sequence8691