TREP, the TRansposable Elements Platform
Fasta file for vulgare RLC elements in total_TREP
Sequences: 53
Total size: 250606 bp
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| Sequence | Size |
|---|---|
| RLC_Hvul_Bianca_AF521177-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 7683 |
| RLC_Hvul_HORPIA2_AF521177-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5141 |
| RLC_Hvul_Boba_AY494981-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5398 |
| RLC_Hvul_Leojyg_AY268139-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 4598 |
| RLC_Hvul_Oref_AY368673-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5028 |
| RLC_Hvul_Inga_AY268139-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 11968 |
| RLC_Hvul_Danica_AY661558-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment of CDS | 1507 |
| RLC_Hvul_Elena_AY661558-2 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment of CDS | 1230 |
| RLC_Hvul_HORPIA_A_AY661558-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element; | 5022 |
| RLC_Hvul_Inga_AY661558-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 12027 |
| RLC_Hvul_Rada_AY661558-1 Hordeum vulgare; Retrotransposon, LTR, Copia; degenreated CDS | 4935 |
| RLC_Hvul_Rada_AY661558-3 Hordeum vulgare; Retrotransposon, LTR, Copia; degenreated CDS | 4588 |
| RLC_Hvul_Valerie_AY661558-2 Hordeum vulgare; Retrotransposon, LTR, Copia; 3' fragment | 2034 |
| RLC_Hvul_Valerie_AY661558-3 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 1532 |
| RLC_Hvul_HORPIA2_AY643843-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 4285 |
| RLC_Hvul_Usier_AY643843-1 Hordeum vulgare; Retrotransposon, LTR, Copia; NULL | 5650 |
| RLC_Hvul_Ikeros_AY013246-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete, non-autonomous | 6529 |
| RLC_Hvul_Inav_AY013246-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5172 |
| RLC_Hvul_unnamed_X85139-1 Hordeum vulgare; Retrotransposon, LTR, Copia; truncated | 220 |
| RLC_Hvul_Usier_AF474982-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 11771 |
| RLC_Hvul_Anna_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; ends truncated? | 7137 |
| RLC_Hvul_Elena_AY853252-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 4038 |
| RLC_Hvul_Georgia_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 1608 |
| RLC_Hvul_Hilda_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment of CDS | 700 |
| RLC_Hvul_Ikya_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 6828 |
| RLC_Hvul_Ikeros_AY853252-2 Hordeum vulgare; Retrotransposon, LTR, Copia; 3'fragment? | 5613 |
| RLC_Hvul_Lena_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; int domain CDS | 855 |
| RLC_Hvul_TAR3_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 3208 |
| RLC_Hvul_TAR4_AY853252-2 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR? | 1608 |
| RLC_Hvul_TAR2_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; 3' fragment? | 5649 |
| RLC_Hvul_TAR2_AY853252-2 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment? | 2131 |
| RLC_Hvul_Zenia_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; CDS | 3600 |
| RLC_Hvul_unnamed_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; CDS fragment | 1441 |
| RLC_Hvul_unnamed_EF067844-2 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment CDS | 3168 |
| RLC_Hvul_Lara_509D2-2 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 2504 |
| RLC_Hvul_Ikya_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 6761 |
| RLC_Hvul_Ivana_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5083 |
| RLC_Hvul_Kasia_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5125 |
| RLC_Hvul_Lara_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; truncated | 735 |
| RLC_Hvul_Lara_EF067844-2 Hordeum vulgare; Retrotransposon, LTR, Copia; 3' truncated | 5146 |
| RLC_Hvul_Rita_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; 3' truncated | 3921 |
| RLC_Hvul_Bianca_509D2-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 7185 |
| RLC_Hvul_unnamed_509D2-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 1502 |
| RLC_Hvul_Gina_M801L24-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 6991 |
| RLC_Hvul_Giselle_M801L24-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 10510 |
| RLC_Hvul_Glenda_M801L24-5 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 5035 |
| RLC_Hvul_TAR2_Gb3-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 6328 |
| RLC_Hvul_Tertia_Hn582D21-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 2410 |
| RLC_Hvul_Teva_Gb3-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 4337 |
| RLC_Hvul_Thea_Gb3-1 Hordeum vulgare; Retrotransposon, LTR, Copia; 5-fragment | 186 |
| RLC_Hvul_Gisela_HvMx296O15-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, solo-LTR | 3538 |
| RLC_Hvul_Gisela_Hv2-13 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 10280 |
| RLC_Hvul_Lara_consensus-1 Hordeum vulgare; Retrotransposon, LTR, Copia; consensus sequence | 9127 |