TREP, the TRansposable Elements Platform
Fasta file for RLC elements in total_TREP
Sequences: 95
Total size: 575317 bp
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| Sequence | Size |
|---|---|
| RLC_Hvul_BARE1_Z17327-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8959 |
| RLC_Taes_BARE1_AJ303051-1 Triticum aestivum; Retrotransposon, LTR, Copia; fragment of 5' region | 268 |
| RLC_Taes_BARE1_AJ303051-2 Triticum aestivum; Retrotransposon, LTR, Copia; fragment of 5' region | 462 |
| RLC_Hvul_BARE1_AY268139-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8608 |
| RLC_Hvul_BARE1_AY268139-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8717 |
| RLC_Hvul_BARE1_AY268139-2 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1778 |
| RLC_Hvul_BARE1_AY268139-5 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1726 |
| RLC_Hvul_BARE1_AY661558-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8944 |
| RLC_Hvul_BARE1_AY661558-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8655 |
| RLC_Hvul_BARE1_AY661558-3 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1847 |
| RLC_Hvul_BARE1_AY661558-4 Hordeum vulgare; Retrotransposon, LTR, Copia; 3'fragment | 7281 |
| RLC_Hvul_BARE1_AY661558-5 Hordeum vulgare; Retrotransposon, LTR, Copia; 5'fragment | 2077 |
| RLC_Hvul_BARE1_AY661558-6 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8928 |
| RLC_Hvul_BARE1_AY661558-7 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8802 |
| RLC_Hvul_BARE1_AY661558-8 Hordeum vulgare; Retrotransposon, LTR, Copia; 3' end 2 bp truncated | 8928 |
| RLC_Hvul_BARE1_AY661558-9 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1821 |
| RLC_Hvul_BARE1_AY643843-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8916 |
| RLC_Hvul_BARE1_AY643844-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8931 |
| RLC_Hvul_BARE1_AY643844-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8957 |
| RLC_Hvul_BARE1_AY643844-5 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8503 |
| RLC_Hvul_BARE1_AY643844-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 1818 |
| RLC_Hvul_BARE1_AY643844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 9203 |
| RLC_Hvul_BARE1_AY643844-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8619 |
| RLC_Hvul_BARE1_AY643844-5 Hordeum vulgare; Retrotransposon, LTR, Copia; NULL | 5021 |
| RLC_Hvul_BARE1_AY643844-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 1807 |
| RLC_Hvul_BARE1_AY643844-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 1813 |
| RLC_Hvul_BARE1_P2A-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8587 |
| RLC_Hvul_BARE1_P2B-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8927 |
| RLC_Hvul_BARE1_AF474982-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8786 |
| RLC_Hvul_BARE1_AF474982-3 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment of 5' region | 2106 |
| RLC_Hvul_BARE1_AF474982-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8629 |
| RLC_Hvul_BARE1_AF474982-4 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment of 5' region | 4492 |
| RLC_Hvul_BARE1_AF474371-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8604 |
| RLC_Hvul_BARE1_AF474371-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8842 |
| RLC_Hvul_BARE1_AF474371-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, degenerated CDS | 8688 |
| RLC_Hvul_BARE1_AF474372-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8606 |
| RLC_Hvul_BARE1_AF474372-2 Hordeum vulgare; Retrotransposon, LTR, Copia; 5' truncated | 5800 |
| RLC_Hvul_BARE1_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1836 |
| RLC_Hvul_BARE1_AF427791-2 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1788 |
| RLC_Hvul_BARE1_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8612 |
| RLC_Hvul_BARE1_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 7673 |
| RLC_Hvul_BARE1_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8586 |
| RLC_Hvul_BARE1_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8585 |
| RLC_Hvul_BARE1_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8614 |
| RLC_Hvul_BARE1_AY853252-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8855 |
| RLC_Hvul_BARE1_AY853252-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 1807 |
| RLC_Hvul_BARE1_AY853252-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8403 |
| RLC_Hvul_BARE1_AY853252-4 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment | 2116 |
| RLC_Hvul_BARE1_EF067844-10 Hordeum vulgare; Retrotransposon, LTR, Copia; 5' truncated | 307 |
| RLC_Hvul_BARE1_EF067844-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8605 |
| RLC_Hvul_BARE1_EF067844-2 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1827 |
| RLC_Hvul_BARE1_EF067844-3 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1821 |
| RLC_Hvul_BARE1_EF067844-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8620 |
| RLC_Hvul_BARE1_EF067844-5 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8834 |
| RLC_Hvul_BARE1_EF067844-6 Hordeum vulgare; Retrotransposon, LTR, Copia; truncated | 5933 |
| RLC_Hvul_BARE1_EF067844-7 Hordeum vulgare; Retrotransposon, LTR, Copia; 3' truncated | 1046 |
| RLC_Hvul_BARE1_EF067844-8 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1831 |
| RLC_Hvul_BARE1_EF067844-9 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1752 |
| RLC_Tunk_BARE1_A_consensus-1 Triticum unknown; Retrotransposon, LTR, Copia; consensus sequence; | 8627 |
| RLC_Tunk_BARE1_B_consensus-1 Triticum unknown; Retrotransposon, LTR, Copia; consensus sequence; | 8928 |
| RLC_Tunk_BARE1_C_consensus-1 Triticum unknown; Retrotransposon, LTR, Copia; consensus sequence; | 8834 |
| RLC_Hvul_BARE1_M191K21-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8372 |
| RLC_Hvul_BARE1_M191K21-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8935 |
| RLC_Hvul_BARE1_M191K21-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8598 |
| RLC_Hvul_BARE1_M801L24-10 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 2702 |
| RLC_Hvul_BARE1_M801L24-12 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8388 |
| RLC_Hvul_BARE1_M801L24-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8622 |
| RLC_Hvul_BARE1_M801L24-3 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8767 |
| RLC_Hvul_BARE1_M801L24-5 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR | 1809 |
| RLC_Hvul_BARE1_M801L24-8 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element | 8788 |
| RLC_Hvul_BARE1_A_Hn582D21-4 Hordeum vulgare; Retrotransposon, LTR, Copia; 5-fragment, subfamily A; | 3071 |
| RLC_Hvul_BARE1_A_HnBtr-13 Hordeum vulgare; Retrotransposon, LTR, Copia; 5-fragment, subfamily A; | 2816 |
| RLC_Hvul_BARE1_A_HnBtr-15 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily A; | 856 |
| RLC_Hvul_BARE1_A_HnBtr-16 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily A; | 411 |
| RLC_Hvul_BARE1_A_HnBtr-1 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily A; | 5819 |
| RLC_Hvul_BARE1_A_HnBtr-2 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily A; | 8602 |
| RLC_Hvul_BARE1_B_Hn582D21-1 Hordeum vulgare; Retrotransposon, LTR, Copia; fragment, subfamily B; | 150 |
| RLC_Hvul_BARE1_B_Hn582D21-2 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily B; | 5162 |
| RLC_Hvul_BARE1_B_Hn582D21-3 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR, subfamily B; | 1808 |
| RLC_Hvul_BARE1_B_Hn582D21-5 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR, subfamily B; | 1822 |
| RLC_Hvul_BARE1_B_HnBtr-10 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily B; | 2116 |
| RLC_Hvul_BARE1_B_HnBtr-11 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily B; | 4222 |
| RLC_Hvul_BARE1_B_HnBtr-12 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B; | 8832 |
| RLC_Hvul_BARE1_B_HnBtr-17 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily B; | 5821 |
| RLC_Hvul_BARE1_B_HnBtr-3 Hordeum vulgare; Retrotransposon, LTR, Copia; 5-fragment, subfamily B; | 8646 |
| RLC_Hvul_BARE1_B_HnBtr-5 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B; | 8836 |
| RLC_Hvul_BARE1_B_HnBtr-7 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B; | 8915 |
| RLC_Hvul_BARE1_B_HnBtr-8 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B; | 8937 |
| RLC_Hvul_BARE1_B_HnBtr-9 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily B; | 8933 |
| RLC_Hvul_BARE1_C_HnBtr-14 Hordeum vulgare; Retrotransposon, LTR, Copia; solo-LTR, subfamily C; | 1792 |
| RLC_Hvul_BARE1_C_HnBtr-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily C; | 8806 |
| RLC_Hvul_BARE1_C_HnBtr-6 Hordeum vulgare; Retrotransposon, LTR, Copia; 5-fragment, subfamily C; | 3133 |
| RLC_Hvul_BARE1_C_M664D5-1 Hordeum vulgare; Retrotransposon, LTR, Copia; complete recombined tandem, subfamily C; | 15591 |
| RLC_Hvul_BARE1_C_M664D5-3 Hordeum vulgare; Retrotransposon, LTR, Copia; 3-fragment, subfamily C; | 9129 |
| RLC_Hvul_BARE1_C_M664D5-4 Hordeum vulgare; Retrotransposon, LTR, Copia; complete element, subfamily C; | 8814 |