TREP, the TRansposable Elements Platform
Fasta file for DTC elements in total_TREP
Sequences: 170
Total size: 1334869 bp
Download fasta as text
Download fasta as zip file
| Sequence | Size |
|---|---|
| DTC_Taes_unnamed_AJ406396-1 Triticum aestivum; DNA-transposon, TIR, CACTA; fragment of transposase | 640 |
| DTC_Tmon_TAT2_231A16-1 Triticum monococcum; DNA-transposon, TIR, CACTA; complete element | 4500 |
| DTC_Tmon_TAT1_AF459088-1 Triticum monococcum; DNA-transposon, TIR, CACTA; complete element | 14570 |
| DTC_Atau_TAT4_AY368673-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element | 1911 |
| DTC_Atau_TAT6_AY494981-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element | 4009 |
| DTC_Hvul_Vincent_AY661558-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 8479 |
| DTC_Hvul_unnamed_AY643843-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 2140 |
| DTC_Atau_Mandrake_AF446141-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element | 3405 |
| DTC_Atau_Jude_AF446141-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element | 6249 |
| DTC_Taes_Mandrake_B_AF234649-1 Triticum aestivum; DNA-transposon, TIR, CACTA; SNAC, complete element; | 1119 |
| DTC_Tmon_Jorge_AF326781-1 Triticum monococcum; DNA-transposon, TIR, CACTA; complete element | 15800 |
| DTC_Tmon_Jorge_231A16-1 Triticum monococcum; DNA-transposon, TIR, CACTA; complete element | 14727 |
| DTC_Hvul_TAT1_AF427791-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 7843 |
| DTC_Hvul_Eddy_Z66528-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; fragment of terminal repeat | 331 |
| DTC_Tmon_Enac_AY146588-1 Triticum monococcum; DNA-transposon, TIR, CACTA; non-autonomous, complete element | 11355 |
| DTC_Tdur_Byron_AY146587-2 Triticum durum; DNA-transposon, TIR, CACTA; complete element | 5090 |
| DTC_Hvul_Gaston_AY853252-9 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 2709 |
| DTC_Hvul_Dagobert_AY853252-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 7858 |
| DTC_Hvul_Nico_AY853252-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; degenerated CDS | 9779 |
| DTC_Hvul_TAT3_AY853252-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element? | 5267 |
| DTC_Taes_Jude_464G14-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete? | 2986 |
| DTC_Taes_TAT5_464G14-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 1150 |
| DTC_Hvul_Francis_EF067844-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 5202 |
| DTC_Hvul_Eddy_EF067844-6 Hordeum vulgare; DNA-transposon, TIR, CACTA; truncated | 997 |
| DTC_Tdur_Heyjude_103H9-2 Triticum durum; DNA-transposon, TIR, CACTA; complete element, hybrid with Jude | 3772 |
| DTC_Hvul_Manor_EF067844-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; truncated | 7035 |
| DTC_Hvul_Manor_EF067844-2 Hordeum vulgare; DNA-transposon, TIR, CACTA; 5' truncated | 4153 |
| DTC_Hvul_unnamed_EF067844-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; fragment | 2424 |
| DTC_Taes_Boris_42j2-2 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 14742 |
| DTC_Taes_Boris_59e04-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 8015 |
| DTC_Taes_Byron_42j2-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 4691 |
| DTC_Tunk_Donald_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 14374 |
| DTC_Tdur_Fergat_103H9-1 Triticum durum; DNA-transposon, TIR, CACTA; complete element | 2874 |
| DTC_Taes_Fergat_42j2-4 Triticum aestivum; DNA-transposon, TIR, CACTA; 5'fragment | 2371 |
| DTC_Hvul_Gaston_M801L24-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element, non-autonomous | 1723 |
| DTC_Taes_Jorge_59e04-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 27219 |
| DTC_Taes_Kane_EF540321-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element, non-autonomous | 1579 |
| DTC_Taes_Mandrake_42j2-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 3299 |
| DTC_Tmon_Pavel_AY188332-1 Triticum monococcum; DNA-transposon, TIR, CACTA; 5'fragment | 5946 |
| DTC_Hvul_Vincent_B_M191K21-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element, contains foreign gene fragments; | 4916 |
| DTC_Taes_Aron_B_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence; | 8556 |
| DTC_Taes_Aron_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 8721 |
| DTC_Taes_Baron_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 8479 |
| DTC_Taes_Chester_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 8216 |
| DTC_Taes_Dario_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 8969 |
| DTC_Taes_Eloy_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence, non-autonomous | 4234 |
| DTC_Taes_Garth_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence, non-autonomous | 1746 |
| DTC_Taes_Garth_B_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence, non-autonomous; | 6968 |
| DTC_Taes_Horace_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 7985 |
| DTC_Taes_Irvin_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence, non-autonomous | 4799 |
| DTC_Taes_Jeffrey_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence, non-autonomous | 4282 |
| DTC_Taes_Korbin_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 8253 |
| DTC_Tunk_Balduin_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 11744 |
| DTC_Tunk_Caspar_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 11568 |
| DTC_Tunk_Clifford_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 11318 |
| DTC_Tunk_Conan_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 11735 |
| DTC_Tunk_Hamlet_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 1385 |
| DTC_Tunk_Isaac_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 21226 |
| DTC_Osat_Baldur_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 8955 |
| DTC_Osat_Benito_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 4256 |
| DTC_Osat_Calvin_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 10759 |
| DTC_Osat_Carson_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 1282 |
| DTC_Osat_Dorian_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 9874 |
| DTC_Osat_Eric_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 10606 |
| DTC_Osat_Grover_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 11420 |
| DTC_Osat_Isidor_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 11265 |
| DTC_Osat_Radon_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 11607 |
| DTC_Osat_Rufus_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 11216 |
| DTC_Osat_Sandro_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 11931 |
| DTC_Osat_Seamus_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 8871 |
| DTC_Osat_Sherman_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 13123 |
| DTC_Osat_Storm_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 12603 |
| DTC_Tunk_Sherlock_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 9517 |
| DTC_Tunk_VincentTIR_consensus-1 Triticum unknown; DNA-transposon, TIR, CACTA; consensus sequence | 1992 |
| DTC_Zmay_Alfred_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 8350 |
| DTC_Zmay_DOPPIA_A_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence; | 9537 |
| DTC_Zmay_En1_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 8287 |
| DTC_Zmay_Eric_B_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence; | 7926 |
| DTC_Zmay_Helios_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 12259 |
| DTC_Zmay_Ivan_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 11135 |
| DTC_Zmay_Joey_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 12258 |
| DTC_Zmay_Norman_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 10413 |
| DTC_Zmay_Oswald_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 10971 |
| DTC_Zmay_Preston_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence | 18869 |
| DTC_Tunk_Cameron_DQ885753-1 Triticum unknown; DNA-transposon, TIR, CACTA; complete element | 1218 |
| DTC_Hvul_Conan_Gb3-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 11522 |
| DTC_Hvul_Manor_Gb3-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 6259 |
| DTC_Taes_Boris_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 15150 |
| DTC_Taes_Byron_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 6466 |
| DTC_Taes_Byron_consensus-2 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 4346 |
| DTC_Taes_Gaston_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 2740 |
| DTC_Taes_JorgeTIRs_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 987 |
| DTC_Taes_Mandrake_B_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence, , subfamily B; | 925 |
| DTC_Taes_Pavel_RND3B-1 Triticum aestivum; DNA-transposon, TIR, CACTA; complete element | 7653 |
| DTC_Bdis_BdisB_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 11807 |
| DTC_Bdis_BdisC_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 9711 |
| DTC_Bdis_BdisD_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 10442 |
| DTC_Bdis_BdisE_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 11787 |
| DTC_Bdis_BdisF_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 11681 |
| DTC_Bdis_BdisG_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 10049 |
| DTC_Bdis_BdisH_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 13655 |
| DTC_Bdis_BdisI_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 11656 |
| DTC_Bdis_BdisJ_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 12226 |
| DTC_Bdis_BdisK_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 12436 |
| DTC_Bdis_BdisL_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 796 |
| DTC_Bdis_BdisM_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 2654 |
| DTC_Bdis_BdisN_consensus-1 Brachypodium distachyon; DNA-transposon, TIR, CACTA; consensus sequence | 6115 |
| DTC_Zmay_Alfred_B_consensus-1 Zea mays; DNA-transposon, TIR, CACTA; consensus sequence, , subfamily B; | 1539 |
| DTC_Sbic_Sbic_G16_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 9239 |
| DTC_Sbic_Sbic_G17_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 10114 |
| DTC_Sbic_Sbic_G18_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 9320 |
| DTC_Sbic_Sbic_G1_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 11088 |
| DTC_Sbic_Sbic_G20_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 8972 |
| DTC_Sbic_Sbic_G21_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 11692 |
| DTC_Sbic_Sbic_G22_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 8861 |
| DTC_Sbic_Sbic_G2_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 10672 |
| DTC_Sbic_Sbic_G3_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 10578 |
| DTC_Sbic_Sbic_G4_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 10572 |
| DTC_Sbic_Sbic_G5_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 8607 |
| DTC_Sbic_Sbic_G6_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 10157 |
| DTC_Sbic_Sbic_G7_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 9090 |
| DTC_Sbic_Sbic_G9_consensus-1 Sorghum bicolor; DNA-transposon, TIR, CACTA; consensus sequence, | 9090 |
| DTC_Ogla_Storm_NA_consensus-1 Oryza glaberrima; DNA-transposon, TIR, CACTA; consensus sequence | 796 |
| DTC_Osat_CA_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 653 |
| DTC_Atau_Jorge_A_consensus-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; consensus sequence | 22464 |
| DTC_Atau_Jorge_B_consensus-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; consensus sequence | 26622 |
| DTC_Atau_Jorge_D_3D-339 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element | 22357 |
| DTC_Atau_TAT7_3DS-1 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element | 1437 |
| DTC_Hvul_Watson_RND-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 7000 |
| DTC_Osat_Alix_RND-1 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 5016 |
| DTC_Osat_Benito_NA_RND-1 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 919 |
| DTC_Osat_Benito_NA_RND-2 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 905 |
| DTC_Osat_Calvin_NA_RND-1 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 1124 |
| DTC_Osat_Calvin_NA_RND-9 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 1221 |
| DTC_Osat_Grover_NA_RND-2 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 1688 |
| DTC_Osat_Janus_consensus-1 Oryza sativa; DNA-transposon, TIR, CACTA; consensus sequence | 12798 |
| DTC_Taes_Vincent_42j2-1 Triticum aestivum; DNA-transposon, TIR, CACTA; fragment | 1976 |
| DTC_Hvul_Watson_Hv69-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; fragment | 5534 |
| DTC_Hvul_Watson_Hv69-2 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 9264 |
| DTC_Hvul_Watson_RND-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 7000 |
| DTC_Ogla_Ted_Os02g44810-1 Oryza glaberrima; DNA-transposon, TIR, CACTA; complete element | 8679 |
| DTC_Ogla_Benny_Os1-1 Oryza glaberrima; DNA-transposon, TIR, CACTA; complete element | 1506 |
| DTC_Osat_Calvin_NA_RND-12 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 1387 |
| DTC_Osat_HUckabee_Os8-1 Oryza sativa; DNA-transposon, TIR, CACTA; complete element | 8740 |
| DTC_Ptri_A_NA_consensus-1 Populus trichocarpa; DNA-transposon, TIR, CACTA; consensus sequence | 1486 |
| DTC_Hvul_Manor_RND-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; codong sequence | 3402 |
| DTC_Hvul_Cliff_Hv1-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 13426 |
| DTC_Nmel_A_RND-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; complete element | 13540 |
| DTC_Nmel_A_RND-2 Neogobius melanostomus; DNA-transposon, TIR, CACTA; complete element | 13143 |
| DTC_Nmel_B_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 13364 |
| DTC_Nmel_D_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 2156 |
| DTC_Nmel_E_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 4372 |
| DTC_Nmel_F_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 11437 |
| DTC_Nmel_G_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 1973 |
| DTC_Nmel_H_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 15486 |
| DTC_Nmel_J_RND-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; fragment | 4097 |
| DTC_Nmel_J_RND-2 Neogobius melanostomus; DNA-transposon, TIR, CACTA; fragment | 2517 |
| DTC_Nmel_K_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 4326 |
| DTC_Nmel_L_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 2121 |
| DTC_Nmel_M_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 11400 |
| DTC_Nmel_N_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 2371 |
| DTC_Nmel_O_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 15143 |
| DTC_Nmel_P_consensus-1 Neogobius melanostomus; DNA-transposon, TIR, CACTA; consensus sequence | 1221 |
| DTC_Mpol_A_consensus-1 Metrosideros polymorpha; DNA-transposon, TIR, CACTA; consensus sequence | 13028 |
| DTC_Mpol_A_RND-1 Metrosideros polymorpha; DNA-transposon, TIR, CACTA; complete element | 13242 |
| DTC_Atau_Jorge_C_3D-312 Aegilops tauschii; DNA-transposon, TIR, CACTA; complete element; | 28406 |
| DTC_Hvul_Balduin_EF067844-3 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 9945 |
| DTC_Hvul_Fergat_Gb3-1 Hordeum vulgare; DNA-transposon, TIR, CACTA; complete element | 3257 |
| DTC_Taes_Tina_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 918 |
| DTC_Taes_Ladon_consensus-1 Triticum aestivum; DNA-transposon, TIR, CACTA; consensus sequence | 1419 |