TREP, the TRansposable Elements Platform
Fasta file for Triticum elements in PTREP
Sequences: 156
Total size: 141762 aa
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| Sequence | Size |
|---|---|
| RIX_Tmon_Ramona_109N23-1 Triticum monococcum; ; polyprotein | 1236 |
| RLC_Tmon_Ale_109N23-1 Triticum monococcum; ; polyprotein | 1562 |
| RLC_Taes_Oref_1020F19-1 Triticum aestivum; ; polyprotein | 1498 |
| RIX_Taes_Ramona_464G14-1 Triticum aestivum; ; polyprotein | 978 |
| RIX_Tdur_Stasy_294D11-1 Triticum durum; ; polyprotein | 1040 |
| DTM_Taes_Xitos_1020F19-1 Triticum aestivum; ; WARNING: likely TF gene derived from transposase | 816 |
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; ; polyprotein | 2113 |
| RIX_Tura_Nala_210J24-1 Triticum urartu; ; polyprotein | 1817 |
| DTM_Tdur_Joseph_AY146587-1 Triticum durum; ; transposase | 864 |
| RIX_Tdur_Karin_AY146587-1 Triticum durum; ; ORF1 protein | 605 |
| RIX_Tdur_Karin_AY146587-1 Triticum durum; ; polyprotein | 1380 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; transposase | 1123 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; transposase | 1122 |
| DTC_Tmon_Caspar_AY146588-1 Triticum monococcum; ; transposase | 1120 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; ORF2 protein | 1088 |
| DTC_Tmon_Caspar_AY146588-1 Triticum monococcum; ; ORF2 protein | 1128 |
| DTC_Tmon_Balduin_AY146588-1 Triticum monococcum; ; transposase | 1186 |
| DTC_Tdur_Isaac_AY146587-1 Triticum durum; ; transposase | 1063 |
| DTC_Taes_TAT1_AF325196-1 Triticum aestivum; ; transposase | 591 |
| RIX_Tmon_Karin_AY146588-1 Triticum monococcum; ; polyprotein | 449 |
| RLG_Tmon_WHAM_AY146588-1 Triticum monococcum; ; gag | 940 |
| RLG_Tmon_Wilma_AY146588-3 Triticum monococcum; ; polyprotein | 1339 |
| DTC_Taes_unnamed_AJ406396-1 Triticum aestivum; ; transposase | 212 |
| RLG_Tmon_Erika_AF326781-1 Triticum monococcum; ; polyprotein | 1480 |
| RLG_Tmon_Fatima_B_AF326781-1 Triticum monococcum; ; hypotehtical protein ; | 1213 |
| RIX_Tmon_Isabelle_AF326781-1 Triticum monococcum; ; polyprotein | 2388 |
| RLC_Tmon_Barbara_AF326781-1 Triticum monococcum; ; ORF1 | 708 |
| RLC_Tmon_Barbara_AF326781-1 Triticum monococcum; ; polyprotein | 1354 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; ORF1 | 531 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; ORF2 | 1482 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; ORF3 | 360 |
| RIX_Tmon_Yvonne_AY146588-1 Triticum monococcum; ; polyprotein | 1135 |
| DTC_Tmon_Balduin_AY146588-2 Triticum monococcum; ; transposase | 604 |
| RLC_Tmon_Angela_609E6-3 Triticum monococcum; ; polyprotein | 1328 |
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; ; polyprotein | 2114 |
| RLG_Tmon_Erika_231A16-2 Triticum monococcum; ; polyprotein | 1479 |
| RLG_Tmon_Fatima_B_609E6-1 Triticum monococcum; ; polyprotein ; | 867 |
| RLG_Tmon_Laura_719C13-1 Triticum monococcum; ; polyprotein | 1431 |
| DTC_Tmon_TAT2_231A16-1 Triticum monococcum; ; hypotehtical protein | 224 |
| RLG_Tmon_WHAM_231A16-1 Triticum monococcum; ; polyprotein | 934 |
| RLG_Tmon_Romani_AY188331-1 Triticum monococcum; ; polyprotein | 881 |
| DTC_Tmon_Balduin_AY146588-1 Triticum monococcum; ; hypotehtical protein | 505 |
| RLC_Tmon_Ale_AF459088-1 Triticum monococcum; ; polyprotein | 1516 |
| RLG_Tmon_Jeli_AF459088-2 Triticum monococcum; ; polyprotein | 1336 |
| RLC_Tmon_TAR1_AF459088-2 Triticum monococcum; ; polyprotein | 1219 |
| RLG_Tmon_Erika_AF459088-1 Triticum monococcum; ; polyprotein | 1498 |
| RLC_Tdur_Angela_AY146587-1 Triticum durum; ; polyprotein | 1329 |
| DTA_Taes_Aurec_58l25-1 Triticum aestivum; ; polyprotein | 753 |
| DTC_Taes_Aron_consensus-1 Triticum aestivum; ; transposase | 1124 |
| DTC_Taes_Baron_consensus-1 Triticum aestivum; ; transposase | 1088 |
| DTC_Taes_Baron_consensus-1 Triticum aestivum; ; ORF2 protein | 519 |
| DTC_Taes_Chester_consensus-1 Triticum aestivum; ; transposase | 1057 |
| DTC_Taes_Chester_consensus-1 Triticum aestivum; ; ORF2 protein | 519 |
| DTC_Taes_Dario_consensus-1 Triticum aestivum; ; transposase | 1029 |
| DTC_Taes_Dario_consensus-1 Triticum aestivum; ; ORF2 protein | 524 |
| DTC_Taes_Horace_consensus-1 Triticum aestivum; ; transposase | 1077 |
| DTC_Taes_Korbin_consensus-1 Triticum aestivum; ; transposase | 1060 |
| DTC_Taes_Korbin_consensus-1 Triticum aestivum; ; ORF2 protein | 416 |
| DTH_Tmon_Rong_AY188332-1 Triticum monococcum; ; transposase | 405 |
| DTM_Taes_Xitos_42j2-1 Triticum aestivum; ; WARNING: likely TF gene derived from transposase | 740 |
| RLG_Taes_Daniela_10k23-1 Triticum aestivum; ; polyprotein | 2014 |
| RLC_Taes_Olivia_42j2-1 Triticum aestivum; ; polyprotein | 1516 |
| RLG_Taes_Latidu_10k23-1 Triticum aestivum; ; polyprotein | 1537 |
| RLG_Tdur_Nusif_103H9-2 Triticum durum; ; polyprotein | 646 |
| RLG_Taes_Nusif_10k23-1 Triticum aestivum; ; ORF2 protein | 418 |
| DHH_Taes_Mothra_RND-1 Triticum aestivum; ; helicase | 691 |
| RLG_Taes_Abiba_A_consensus-1 Triticum aestivum; ; polyprotein | 1500 |
| RLG_Taes_Abiba_A_consensus-1 Triticum aestivum; ; GAG | 337 |
| RLC_Taes_Angela_B_consensus-2 Triticum aestivum; ; polyprotein; | 1329 |
| RLC_Taes_Angela_A_consensus-2 Triticum aestivum; ; polyprotein; | 1203 |
| RLG_Taes_Sabrina_NA3_consensus-3 Triticum aestivum; ; ORF3; | 451 |
| RLG_Taes_Sabrina_NA5_consensus-3 Triticum aestivum; ; ORF5, virus like particle; | 182 |
| RLG_Taes_Sabrina_NA6_consensus-3 Triticum aestivum; ; ORF6, virus like particle; | 271 |
| RLG_Taes_Sabrina_NA7_consensus-3 Triticum aestivum; ; ORF7, DNA binding; | 278 |
| RLG_Taes_Sabrina_NA8_consensus-3 Triticum aestivum; ; polyprotein; | 382 |
| RLG_Taes_Sabrina_SA_consensus-4 Triticum aestivum; ; polyprotein; | 694 |
| RLG_Taes_Sabrina_NA4_consensus-3 Triticum aestivum; ; ORF4; | 199 |
| RLG_Taes_Wilma_A1_consensus-3 Triticum aestivum; ; polyprotein; | 1579 |
| RLG_Taes_Wilma_A2_consensus-3 Triticum aestivum; ; polyprotein; | 1581 |
| RLG_Taes_Wilma_A3_consensus-3 Triticum aestivum; ; polyprotein; | 1580 |
| RLG_Taes_Wilma_B1_consensus-3 Triticum aestivum; ; polyprotein; | 1582 |
| RLG_Taes_Wilma_B2_consensus-3 Triticum aestivum; ; polyprotein; | 1577 |
| RLG_Taes_Wilma_B3_consensus-3 Triticum aestivum; ; polyprotein; | 1577 |
| RLG_Taes_Wilma_C_consensus-3 Triticum aestivum; ; polyprotein; | 1579 |
| RLG_Taes_Wilma_D1_consensus-3 Triticum aestivum; ; polyprotein; | 1580 |
| RLG_Taes_Sabrina_SAA1_consensus-3 Triticum aestivum; ; polyprotein; | 692 |
| RLG_Taes_Sabrina_SAA2_consensus-3 Triticum aestivum; ; polyprotein; | 693 |
| RLG_Taes_Sabrina_SAA3_consensus-3 Triticum aestivum; ; polyprotein; | 694 |
| RLG_Taes_Sabrina_SAB1_consensus-3 Triticum aestivum; ; polyprotein; | 692 |
| RLG_Taes_Sabrina_SAB2_consensus-3 Triticum aestivum; ; polyprotein; | 694 |
| RLG_Taes_Sabrina_SAB3_consensus-3 Triticum aestivum; ; polyprotein; | 694 |
| RLG_Taes_Sabrina_SAC_consensus-3 Triticum aestivum; ; polyprotein; | 694 |
| RLG_Taes_Sabrina_SAD1_consensus-3 Triticum aestivum; ; polyprotein; | 694 |
| RLG_Taes_WHAM_A1A_consensus-3 Triticum aestivum; ; polyprotein; | 942 |
| RLG_Taes_WHAM_A1A_consensus-3 Triticum aestivum; ; ORF2; | 353 |
| RLG_Taes_WHAM_A1B_consensus-3 Triticum aestivum; ; polyprotein; | 942 |
| RLG_Taes_WHAM_A1B_consensus-3 Triticum aestivum; ; ORF2; | 382 |
| RLG_Taes_WHAM_A2A_consensus-3 Triticum aestivum; ; polyprotein; | 938 |
| RLG_Taes_WHAM_A2A_consensus-3 Triticum aestivum; ; ORF2; | 343 |
| RLG_Taes_WHAM_A3A_consensus-3 Triticum aestivum; ; polyprotein; | 934 |
| RLG_Taes_WHAM_A3A_consensus-3 Triticum aestivum; ; ORF2; | 342 |
| RLG_Taes_WHAM_B1A_consensus-3 Triticum aestivum; ; polyprotein; | 941 |
| RLG_Taes_WHAM_B1A_consensus-3 Triticum aestivum; ; ORF2; | 342 |
| RLG_Taes_WHAM_B2A_consensus-3 Triticum aestivum; ; polyprotein; | 939 |
| RLG_Taes_WHAM_B2A_consensus-3 Triticum aestivum; ; ORF2; | 342 |
| RLG_Taes_WHAM_B2B_consensus-3 Triticum aestivum; ; polyprotein; | 939 |
| RLG_Taes_WHAM_B2B_consensus-3 Triticum aestivum; ; ORF2; | 362 |
| RLG_Taes_WHAM_B3A_consensus-3 Triticum aestivum; ; polyprotein; | 935 |
| RLG_Taes_WHAM_B3A_consensus-3 Triticum aestivum; ; ORF2; | 322 |
| RLG_Taes_WHAM_C1A_consensus-3 Triticum aestivum; ; polyprotein; | 914 |
| RLG_Taes_WHAM_C1A_consensus-3 Triticum aestivum; ; ORF2; | 349 |
| RLG_Taes_WHAM_C1B_consensus-3 Triticum aestivum; ; polyprotein; | 912 |
| RLG_Taes_WHAM_C1B_consensus-3 Triticum aestivum; ; ORF2; | 361 |
| RLG_Taes_WHAM_D1A_consensus-3 Triticum aestivum; ; polyprotein; | 937 |
| RLG_Taes_WHAM_D1A_consensus-3 Triticum aestivum; ; ORF2; | 331 |
| DTA_Taes_George_chr1B-1003 Triticum aestivum; ; transposase | 847 |
| DTA_Taes_George_chr1D-1005 Triticum aestivum; ; transposase | 829 |
| DTA_Taes_Georgie_consensus-1 Triticum aestivum; ; transposase | 832 |
| DTC_Taes_TAT1_consensus-1 Triticum aestivum; ; transposase | 1190 |
| DTH_Taes_Eragon_consensus-1 Triticum aestivum; ; transposase | 430 |
| DTH_Taes_Eragon_consensus-2 Triticum aestivum; ; transposase | 430 |
| DTC_Taes_TAT1_consensus-1 Triticum aestivum; ; ORF2 | 604 |
| DTC_Taes_TAT1_consensus-1 Triticum aestivum; ; ORF3 | 319 |
| DTM_Taes_Ryemu_consensus-1 Triticum aestivum; ; transposase | 944 |
| DTM_Taes_Ryemu_consensus-1 Triticum aestivum; ; ORF2 | 205 |
| DTH_Taes_Radius_A_consensus-1 Triticum aestivum; ; ORF2; | 379 |
| DTH_Taes_Radius_B_consensus-1 Triticum aestivum; ; ORF2; | 353 |
| DTH_Taes_Radius_C_consensus-1 Triticum aestivum; ; ORF2; | 374 |
| DTH_Taes_Radius_D_consensus-1 Triticum aestivum; ; ORF2; | 343 |
| DTH_Taes_Radius_E_consensus-1 Triticum aestivum; ; ORF2; | 281 |
| RLG_Taes_Fatima_A_consensus-3 Triticum aestivum; ; polyprotein; | 1372 |
| RLG_Taes_Fatima_A_consensus-3 Triticum aestivum; ; GAG; | 366 |
| RLG_Taes_Fatima_B_consensus-3 Triticum aestivum; ; GAG; | 547 |
| RLG_Taes_Fatima_B_consensus-3 Triticum aestivum; ; ORF2; | 444 |
| RLG_Taes_Fatima_C_consensus-3 Triticum aestivum; ; GAG; | 470 |
| RLG_Taes_Fatima_C_consensus-3 Triticum aestivum; ; ORF2; | 375 |
| RLG_Tmon_Abia_consensus-3 Triticum monococcum; ; polyprotein | 1925 |
| RLG_Tmon_Cereba_AncTm1_consensus-4 Triticum monococcum; ; polyprotein; | 1695 |
| RLG_Tmon_Cereba_Tm1_consensus-4 Triticum monococcum; ; polyprotein; | 1639 |
| RLG_Tmon_Cereba_Tm2_consensus-4 Triticum monococcum; ; polyprotein; | 1678 |
| RLG_Tmon_Cereba_Tm3_consensus-4 Triticum monococcum; ; polyprotein; | 1659 |
| RLG_Tmon_Cereba_Tm4_consensus-4 Triticum monococcum; ; polyprotein; | 1658 |
| DTH_Taes_Ionos_consensus-2 Triticum aestivum; ; transposase | 465 |
| RLG_Taes_Quinta_A1_consensus-1 Triticum aestivum; ; GAG_DUF; | 680 |
| RLG_Taes_Quinta_B1_consensus-1 Triticum aestivum; ; GAG_DUF; | 669 |
| RLG_Taes_Quinta_A1_consensus-1 Triticum aestivum; ; GAG_DUF; | 680 |
| RLG_Taes_Quinta_B1_consensus-1 Triticum aestivum; ; GAG_DUF; | 669 |
| RLG_Taes_Quinta_A1_consensus-1 Triticum aestivum; ; GAG_DUF; | 668 |
| RLG_Taes_Quinta_B1_consensus-1 Triticum aestivum; ; GAG_DUF; | 669 |
| RLG_Tmon_Quinta_A1_consensus-1 Triticum monococcum; ; GAG_DUF; | 668 |
| RLG_Tmon_Quinta_A2_consensus-4 Triticum monococcum; ; GAG_DUF; | 670 |
| DTC_Taes_Julian_consensus-2 Triticum aestivum; ; transposase | 960 |
| DTC_Taes_Julian_consensus-2 Triticum aestivum; ; ORF3 | 309 |
| DTC_Taes_Julian_consensus-2 Triticum aestivum; ; ORF4 | 134 |
| DHH_Taes_Feng8_RND-1 Triticum aestivum; ; helicase | 1455 |
| RLC_Tmon_Ale_chr1Am-0055 Triticum monococcum; ; polyprotein | 1449 |