TREP, the TRansposable Elements Platform
Fasta file for Triticum elements in PTREP
Sequences: 121
Total size: 131261 aa
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| Sequence | Size |
|---|---|
| RIX_Tmon_Ramona_109N23-1 Triticum monococcum; ; polyprotein | 1236 |
| RLC_Tmon_Ale_109N23-1 Triticum monococcum; ; polyprotein | 1562 |
| RLC_Taes_Oref_1020F19-1 Triticum aestivum; ; polyprotein | 1498 |
| RIX_Taes_Ramona_464G14-1 Triticum aestivum; ; polyprotein | 978 |
| RIX_Tdur_Stasy_294D11-1 Triticum durum; ; polyprotein | 1040 |
| DTM_Taes_Xitos_1020F19-1 Triticum aestivum; ; WARNING: likely TF gene derived from transposase | 816 |
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; ; polyprotein | 2113 |
| RIX_Tura_Nala_210J24-1 Triticum urartu; ; polyprotein | 1817 |
| DTM_Tdur_Joseph_AY146587-1 Triticum durum; ; transposase | 864 |
| RIX_Tdur_Karin_AY146587-1 Triticum durum; ; ORF1 protein | 605 |
| RIX_Tdur_Karin_AY146587-1 Triticum durum; ; polyprotein | 1380 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; transposase | 1123 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; transposase | 1122 |
| DTC_Tmon_Caspar_AY146588-1 Triticum monococcum; ; transposase | 1120 |
| DTC_Tmon_Clifford_AY146588-1 Triticum monococcum; ; ORF2 protein | 1088 |
| DTC_Tmon_Caspar_AY146588-1 Triticum monococcum; ; ORF2 protein | 1128 |
| DTC_Tmon_Balduin_AY146588-1 Triticum monococcum; ; transposase | 1186 |
| DTC_Tdur_Isaac_AY146587-1 Triticum durum; ; transposase | 1063 |
| DTC_Taes_TAT1_AF325196-1 Triticum aestivum; ; transposase | 591 |
| RIX_Tmon_Karin_AY146588-1 Triticum monococcum; ; polyprotein | 449 |
| RLG_Tmon_WHAM_AY146588-1 Triticum monococcum; ; gag | 940 |
| RLG_Tmon_Wilma_AY146588-3 Triticum monococcum; ; polyprotein | 1339 |
| DTC_Taes_unnamed_AJ406396-1 Triticum aestivum; ; transposase | 212 |
| RLG_Tmon_Erika_AF326781-1 Triticum monococcum; ; polyprotein | 1480 |
| RLG_Tmon_Fatima_B_AF326781-1 Triticum monococcum; ; hypotehtical protein ; | 1213 |
| RIX_Tmon_Isabelle_AF326781-1 Triticum monococcum; ; polyprotein | 2388 |
| RLC_Tmon_Barbara_AF326781-1 Triticum monococcum; ; polyprotein | 708 |
| RLC_Tmon_Barbara_AF326781-1 Triticum monococcum; ; polyprotein | 1354 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; hypotehtical protein 1 | 531 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; hypotehtical protein 2 | 1482 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; ; hypotehtical protein 3 | 360 |
| RIX_Tmon_Yvonne_AY146588-1 Triticum monococcum; ; polyprotein | 1135 |
| DTC_Tmon_Balduin_AY146588-2 Triticum monococcum; ; transposase | 604 |
| RLC_Tmon_Angela_609E6-3 Triticum monococcum; ; polyprotein | 1328 |
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; ; polyprotein | 2114 |
| RLG_Tmon_Erika_231A16-2 Triticum monococcum; ; polyprotein | 1479 |
| RLG_Tmon_Fatima_B_609E6-1 Triticum monococcum; ; polyprotein ; | 867 |
| RLG_Tmon_Laura_719C13-1 Triticum monococcum; ; polyprotein | 1431 |
| DTC_Tmon_TAT2_231A16-1 Triticum monococcum; ; hypotehtical protein | 224 |
| RLG_Tmon_WHAM_231A16-1 Triticum monococcum; ; polyprotein | 934 |
| RLG_Tmon_Romani_AY188331-1 Triticum monococcum; ; polyprotein | 881 |
| DTC_Tmon_Balduin_AY146588-1 Triticum monococcum; ; hypotehtical protein | 505 |
| RLC_Tmon_Ale_AF459088-1 Triticum monococcum; ; polyprotein | 1516 |
| RLG_Tmon_Jeli_AF459088-2 Triticum monococcum; ; polyprotein | 1336 |
| RLC_Tmon_TAR1_AF459088-2 Triticum monococcum; ; polyprotein | 1219 |
| RLG_Tmon_Erika_AF459088-1 Triticum monococcum; ; polyprotein | 1498 |
| RLC_Tdur_Angela_AY146587-1 Triticum durum; ; polyprotein | 1329 |
| DTA_Taes_Aurec_58l25-1 Triticum aestivum; ; polyprotein | 753 |
| DTC_Taes_Aron_consensus-1 Triticum aestivum; ; transposase | 1124 |
| DTC_Tunk_Balduin_consensus-1 Triticum unknown; ; transposase | 1160 |
| DTC_Tunk_Balduin_consensus-1 Triticum unknown; ; ORF2 protein | 510 |
| DTC_Taes_Baron_consensus-1 Triticum aestivum; ; transposase | 1088 |
| DTC_Taes_Baron_consensus-1 Triticum aestivum; ; ORF2 protein | 519 |
| DTC_Tunk_Caspar_consensus-1 Triticum unknown; ; transposase | 1106 |
| DTC_Tunk_Caspar_consensus-1 Triticum unknown; ; ORF2 protein | 1144 |
| DTC_Taes_Chester_consensus-1 Triticum aestivum; ; transposase | 1057 |
| DTC_Taes_Chester_consensus-1 Triticum aestivum; ; ORF2 protein | 519 |
| DTC_Tunk_Clifford_consensus-1 Triticum unknown; ; transposase | 1073 |
| DTC_Tunk_Clifford_consensus-1 Triticum unknown; ; ORF2 protein | 1096 |
| DTC_Tunk_Conan_consensus-1 Triticum unknown; ; transposase | 1140 |
| DTC_Tunk_Conan_consensus-1 Triticum unknown; ; ORF2 protein | 1125 |
| DTC_Taes_Dario_consensus-1 Triticum aestivum; ; transposase | 1029 |
| DTC_Taes_Dario_consensus-1 Triticum aestivum; ; ORF2 protein | 524 |
| DTC_Taes_Horace_consensus-1 Triticum aestivum; ; transposase | 1077 |
| DTC_Tunk_Isaac_consensus-1 Triticum unknown; ; transposase | 1071 |
| DTC_Tunk_Isaac_consensus-1 Triticum unknown; ; ORF2 protein | 472 |
| DTC_Taes_Korbin_consensus-1 Triticum aestivum; ; transposase | 1060 |
| DTC_Taes_Korbin_consensus-1 Triticum aestivum; ; ORF2 protein | 416 |
| DTC_Tunk_Donald_consensus-1 Triticum unknown; ; polyprotein | 415 |
| DTH_Tunk_Kong_consensus-1 Triticum unknown; ; transposase | 433 |
| DTH_Tmon_Rong_AY188332-1 Triticum monococcum; ; transposase | 405 |
| DTM_Tunk_Pilifon_AY485644-1 Triticum unknown; ; WARNING: likely TF gene derived from transposase | 750 |
| DTM_Taes_Xitos_42j2-1 Triticum aestivum; ; WARNING: likely TF gene derived from transposase | 740 |
| RIX_Tunk_Karin_consensus-1 Triticum unknown; ; polyprotein | 1223 |
| RIX_Tunk_Karin_consensus-1 Triticum unknown; ; ORF1 protein | 937 |
| RLC_Tunk_BARE1_B_consensus-1 Triticum unknown; ; polyprotein ; | 1327 |
| RLC_Tunk_BARE1_C_consensus-1 Triticum unknown; ; polyprotein ; | 1328 |
| RLG_Taes_Daniela_10k23-1 Triticum aestivum; ; polyprotein | 2014 |
| RLC_Tunk_Eugene_consensus-1 Triticum unknown; ; polyprotein | 798 |
| RLG_Tunk_Fatima_B_consensus-1 Triticum unknown; ; transposase ; | 557 |
| RLG_Tunk_Fatima_B_consensus-1 Triticum unknown; ; ORF2 protein ; | 310 |
| RLG_Tunk_Fatima_consensus-1 Triticum unknown; ; polyprotein | 1704 |
| RLG_Tunk_Fatima_consensus-1 Triticum unknown; ; ORF2 protein | 415 |
| RLC_Tunk_Maximus_consensus-1 Triticum unknown; ; polyprotein | 1979 |
| RLC_Tunk_Maximus_consensus-1 Triticum unknown; ; ORF2 protein | 470 |
| RLC_Tunk_Maximus_consensus-1 Triticum unknown; ; ORF3 protein | 454 |
| RLC_Taes_Olivia_42j2-1 Triticum aestivum; ; polyprotein | 1516 |
| RLC_Tunk_WIS_B_consensus-1 Triticum unknown; ; transposase ; | 1326 |
| RLG_Tunk_BAGY2_consensus-1 Triticum unknown; ; polyprotein | 1400 |
| RLG_Tunk_Carmilla_consensus-1 Triticum unknown; ; polyprotein | 2141 |
| RLG_Tunk_Carmilla_consensus-1 Triticum unknown; ; ORF2 protein | 267 |
| RLG_Tunk_Erika_consensus-1 Triticum unknown; ; polyprotein | 1499 |
| RLG_Tunk_Fatima_consensus-1 Triticum unknown; ; polyprotein | 1703 |
| RLG_Tunk_Geneva_consensus-1 Triticum unknown; ; polyprotein | 2335 |
| RLG_Tunk_Jeli_consensus-1 Triticum unknown; ; polyprotein | 1332 |
| RLG_Taes_Latidu_10k23-1 Triticum aestivum; ; polyprotein | 1537 |
| RLG_Tunk_Laura_consensus-1 Triticum unknown; ; polyprotein | 1491 |
| RLG_Tdur_Nusif_103H9-2 Triticum durum; ; polyprotein | 646 |
| RLG_Taes_Nusif_10k23-1 Triticum aestivum; ; ORF2 protein | 418 |
| RLG_Tunk_Sabrina_consensus-1 Triticum unknown; ; polyprotein | 691 |
| RLG_Tunk_WHAM_consensus-1 Triticum unknown; ; polyprotein | 925 |
| DTT_Tunk_Mercia_DQ885768-1 Triticum unknown; ; Transposase | 576 |
| RLG_Tunk_Haight_consensus-1 Triticum unknown; ; Polyprotein (NULL) | 1255 |
| DHH_Taes_Mothra_RND-1 Triticum aestivum; ; RPA homolog | 691 |
| DHH_Taes_Mothra_RND-1 Triticum aestivum; ; RPA homolog | 691 |
| RLG_Taes_Abiba_A_consensus-1 Triticum aestivum; ; polyprotein | 1500 |
| RLG_Taes_Abiba_A_consensus-1 Triticum aestivum; ; GAG | 337 |
| RLC_Taes_Angela_B_consensus-2 Triticum aestivum; ; polyprotein; | 1329 |
| RLC_Taes_Angela_A_consensus-2 Triticum aestivum; ; polyprotein; | 1203 |
| RLC_Taes_Angela_AA1_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1327 |
| RLC_Taes_Angela_AA2_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1327 |
| RLC_Taes_Angela_AA3_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1327 |
| RLC_Taes_Angela_AA4_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1333 |
| RLC_Taes_Angela_BA1_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_BA2_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_BA3_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_BA4_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_BA5_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_BA6_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_BA7_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1329 |
| RLC_Taes_Angela_CA1_consensus-3 Triticum aestivum; ; polyprotein; variety=ArinaLrForv3; | 1327 |