TREP, the TRansposable Elements Platform
Fasta file for Triticeae elements in PTREP
Sequences: 37
Total size: 39247 aa
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| Sequence | Size |
|---|---|
| DTC_Tspe_Balduin_consensus-1 Triticeae species; ; transposase | 1160 |
| DTC_Tspe_Balduin_consensus-1 Triticeae species; ; ORF2 protein | 510 |
| DTC_Tspe_Caspar_consensus-1 Triticeae species; ; transposase | 1106 |
| DTC_Tspe_Caspar_consensus-1 Triticeae species; ; ORF2 protein | 1144 |
| DTC_Tspe_Clifford_consensus-1 Triticeae species; ; transposase | 1073 |
| DTC_Tspe_Clifford_consensus-1 Triticeae species; ; ORF2 protein | 1096 |
| DTC_Tspe_Conan_consensus-1 Triticeae species; ; transposase | 1140 |
| DTC_Tspe_Conan_consensus-1 Triticeae species; ; ORF2 protein | 1125 |
| DTC_Tspe_Isaac_consensus-1 Triticeae species; ; transposase | 1071 |
| DTC_Tspe_Isaac_consensus-1 Triticeae species; ; ORF2 protein | 472 |
| DTC_Tspe_Donald_consensus-1 Triticeae species; ; polyprotein | 415 |
| DTH_Tspe_Kong_consensus-1 Triticeae species; ; transposase | 433 |
| DTM_Tspe_Pilifon_AY485644-1 Triticeae species; ; WARNING: likely TF gene derived from transposase | 750 |
| RIX_Tspe_Karin_consensus-1 Triticeae species; ; polyprotein | 1223 |
| RIX_Tspe_Karin_consensus-1 Triticeae species; ; ORF1 protein | 937 |
| RLC_Tspe_BARE1_B_consensus-1 Triticeae species; ; polyprotein ; | 1327 |
| RLC_Tspe_BARE1_C_consensus-1 Triticeae species; ; polyprotein ; | 1328 |
| RLC_Tspe_Eugene_consensus-1 Triticeae species; ; polyprotein | 798 |
| RLG_Tspe_Fatima_B_consensus-1 Triticeae species; ; transposase ; | 557 |
| RLG_Tspe_Fatima_B_consensus-1 Triticeae species; ; ORF2 protein ; | 310 |
| RLG_Tspe_Fatima_consensus-1 Triticeae species; ; polyprotein | 1704 |
| RLG_Tspe_Fatima_consensus-1 Triticeae species; ; ORF2 protein | 415 |
| RLC_Tspe_Maximus_consensus-1 Triticeae species; ; polyprotein | 1979 |
| RLC_Tspe_Maximus_consensus-1 Triticeae species; ; ORF2 protein | 470 |
| RLC_Tspe_Maximus_consensus-1 Triticeae species; ; ORF3 protein | 454 |
| RLC_Tspe_WIS_B_consensus-1 Triticeae species; ; transposase ; | 1326 |
| RLG_Tspe_BAGY2_consensus-1 Triticeae species; ; polyprotein | 1400 |
| RLG_Tspe_Carmilla_consensus-1 Triticeae species; ; polyprotein | 2141 |
| RLG_Tspe_Carmilla_consensus-1 Triticeae species; ; ORF2 protein | 267 |
| RLG_Tspe_Erika_consensus-1 Triticeae species; ; polyprotein | 1499 |
| RLG_Tspe_Fatima_consensus-1 Triticeae species; ; polyprotein | 1703 |
| RLG_Tspe_Geneva_consensus-1 Triticeae species; ; polyprotein | 2335 |
| RLG_Tspe_Jeli_consensus-1 Triticeae species; ; polyprotein | 1332 |
| RLG_Tspe_Laura_consensus-1 Triticeae species; ; polyprotein | 1491 |
| RLG_Tspe_WHAM_consensus-1 Triticeae species; ; polyprotein | 925 |
| DTT_Tspe_Mercia_DQ885768-1 Triticeae species; ; Transposase | 576 |
| RLG_Tspe_Haight_consensus-1 Triticeae species; ; Polyprotein (NULL) | 1255 |