TREP, the TRansposable Elements Platform
Fasta file for Oryza elements in PTREP
Sequences: 66
Total size: 66310 aa
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| Sequence | Size |
|---|---|
| DTC_Osat_Baldur_consensus-1 Oryza sativa; ; transposase | 1140 |
| DTC_Osat_Baldur_consensus-1 Oryza sativa; ; ORF2 protein | 539 |
| DTC_Osat_Calvin_consensus-1 Oryza sativa; ; transposase | 1111 |
| DTC_Osat_Calvin_consensus-1 Oryza sativa; ; ORF2 protein | 1055 |
| DTC_Osat_Dorian_consensus-1 Oryza sativa; ; transposase | 1115 |
| DTC_Osat_Dorian_consensus-1 Oryza sativa; ; ORF2 protein | 1054 |
| DTC_Osat_Eric_consensus-1 Oryza sativa; ; transposase | 1054 |
| DTC_Osat_Eric_consensus-1 Oryza sativa; ; ORF2 protein | 848 |
| DTC_Osat_Grover_consensus-1 Oryza sativa; ; transposase | 1096 |
| DTC_Osat_Grover_consensus-1 Oryza sativa; ; ORF2 protein | 877 |
| DTC_Osat_Isidor_consensus-1 Oryza sativa; ; transposase | 1145 |
| DTC_Osat_Isidor_consensus-1 Oryza sativa; ; ORF2 protein | 511 |
| DTC_Osat_Janus_consensus-1 Oryza sativa; ; transposase | 1083 |
| DTC_Osat_Janus_consensus-1 Oryza sativa; ; ORF2 protein | 533 |
| DTC_Osat_Radon_consensus-1 Oryza sativa; ; transposase | 1140 |
| DTC_Osat_Radon_consensus-1 Oryza sativa; ; ORF2 protein | 480 |
| DTC_Osat_Rufus_consensus-1 Oryza sativa; ; transposase | 1152 |
| DTC_Osat_Rufus_consensus-1 Oryza sativa; ; ORF2 protein | 506 |
| DTC_Osat_Sandro_consensus-1 Oryza sativa; ; transposase | 1070 |
| DTC_Osat_Seamus_consensus-1 Oryza sativa; ; transposase | 1139 |
| DTC_Osat_Seamus_consensus-1 Oryza sativa; ; ORF2 protein | 514 |
| DTC_Osat_Sherman_consensus-1 Oryza sativa; ; transposase | 1123 |
| DTC_Osat_Sherman_consensus-1 Oryza sativa; ; ORF2 protein | 738 |
| DTC_Osat_Storm_consensus-1 Oryza sativa; ; transposase | 1119 |
| DTC_Osat_Storm_consensus-1 Oryza sativa; ; ORF2 protein | 629 |
| DTH_Osat_OsKong_OSTIGR5-101 Oryza sativa; ; transposase | 441 |
| DTH_Osat_Pong_BK000586-1 Oryza sativa; ; transposase | 340 |
| DTH_Osat_Pong_BK000586-1 Oryza sativa; ; ORF2 protein | 482 |
| RLG_Osat_OsTaz_consensus-1 Oryza sativa; ; polyprotein | 1185 |
| DHH_Osat_Eponine_RND-1 Oryza sativa; ; helicase | 1417 |
| DHH_Osat_Erasto_RND-1 Oryza sativa; ; helicase | 985 |
| RLG_Osat_hopi_RND-1 Oryza sativa; ; Polyprotein (NULL) | 2052 |
| RLG_Osat_Osr30_RND-1 Oryza sativa; ; Polyprotein (NULL) | 1346 |
| RLG_Osat_Retrosat1_RND-1 Oryza sativa; ; Polyprotein (NULL) | 2037 |
| DTH_Ogla_Baba_c3p9479789-1 Oryza glaberrima; ; transposase | 402 |
| RLC_Ogla_Owis_RND-1 Oryza glaberrima; ; polyprotein | 1320 |
| DHH_Osat_Mothra3_RND-1 Oryza sativa; ; RPA homolog | 600 |
| DHH_Osat_Mothra_RND-1 Oryza sativa; ; RPA homolog | 472 |
| RLC_Osat_Rare1_Os7-5 Oryza sativa; ; polyprotein | 1043 |
| RLC_Osat_Rare1_Os7-5 Oryza sativa; ; GAG | 377 |
| RLC_Osat_Rare3_RND-1 Oryza sativa; ; polyprotein | 1439 |
| RLG_Osat_GA_Og3-1 Oryza sativa; ; polyprotein | 793 |
| DHH_Osat_MF_RND-1 Oryza sativa; ; RPA homolog | 1440 |
| DHH_Osat_Mothra2_RND-1 Oryza sativa; ; RPA homolog | 392 |
| DHH_Osat_Mothra3_RND-1 Oryza sativa; ; RPA homolog | 600 |
| DTC_Osat_HUckabee_Os8-1 Oryza sativa; ; transposase | 1105 |
| DTC_Osat_Janus_consensus-1 Oryza sativa; ; transposase | 1083 |
| DTM_Ogla_MAG_Os1-1 Oryza glaberrima; ; transposase | 970 |
| RIX_Osat_Rare5_Og11-1 Oryza sativa; ; polyprotein | 860 |
| RIX_Osat_Rare5_Og11-1 Oryza sativa; ; ORF1 | 821 |
| RLC_Osat_Rare2_RND-1 Oryza sativa; ; polyprotein | 1030 |
| RLC_Osat_Rare2_RND-1 Oryza sativa; ; ORF2 | 211 |
| RLC_Osat_Rare3_RND-1 Oryza sativa; ; polyprotein | 1439 |
| RLC_Osat_Simone_RND-1 Oryza sativa; ; polyprotein | 1439 |
| RLG_Osat_GA_Og3-1 Oryza sativa; ; polyprotein | 793 |
| XXX_Osat_Hypo_consensus-1 Oryza sativa; ; polyprotein | 242 |
| RLC_Osat_TAR10_consensus-1 Oryza sativa; ; polyprotein | 1340 |
| RLC_Osat_TAR2_consensus-1 Oryza sativa; ; polyprotein | 1329 |
| RLG_Osat_Cereba_B_chr01-11 Oryza sativa; ; polyprotein; | 1501 |
| RLG_Osat_Cereba_B_chr01-2 Oryza sativa; ; polyprotein; | 1641 |
| RLG_Osat_Cereba_C_chr01-5 Oryza sativa; ; polyprotein; | 867 |
| RLG_Osat_RAF_chr01-6 Oryza sativa; ; polyprotein | 1288 |
| RLG_Osat_RIRE7_chr01-9 Oryza sativa; ; ORF2 | 1409 |
| RLG_Osat_Cereba_C_consensus-1 Oryza sativa; ; polyprotein; | 1661 |
| RLG_Osat_CR10_RND-1 Oryza sativa; ; polyprotein | 1714 |
| RLG_Osat_RIRE7_chr01-9 Oryza sativa; ; polyprotein | 1633 |