TREP, the TRansposable Elements Platform
Fasta file for vulgare elements in PTREP
Sequences: 96
Total size: 98010 aa
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| Sequence | Size |
|---|---|
| RLC_Hvul_Ikya_AY853252-1 Hordeum vulgare; ; polyprotein | 1386 |
| RLC_Hvul_Lena_AY853252-1 Hordeum vulgare; ; polyprotein | 285 |
| DTM_Hvul_Oscar_AY853252-1 Hordeum vulgare; ; transposase | 674 |
| RIX_Hvul_Yolanda_AY853252-1 Hordeum vulgare; ; polyprotein | 689 |
| RLC_Hvul_Zenia_AY853252-1 Hordeum vulgare; ; polyprotein | 1122 |
| RLC_Hvul_HORPIA2_AF427791-1 Hordeum vulgare; ; polyprotein | 1517 |
| RLC_Hvul_Ikya_EF067844-1 Hordeum vulgare; ; hypotehtical protein | 1173 |
| RLC_Hvul_Ikya_AY853252-1 Hordeum vulgare; ; polyprotein | 1332 |
| RLC_Hvul_Ivana_EF067844-1 Hordeum vulgare; ; polyprotein | 1368 |
| DTC_Hvul_Caspar_TREP788-1 Hordeum vulgare; ; transposase | 1044 |
| DTC_Hvul_Caspar_TREP788-1 Hordeum vulgare; ; ORF2 protein | 1292 |
| DTC_Hvul_Clifford_TREP770-1 Hordeum vulgare; ; ORF2 protein | 1069 |
| DTC_Hvul_Donald_AF427791-1 Hordeum vulgare; ; ORF2 protein | 968 |
| DTC_Hvul_Donald_AF474373-1 Hordeum vulgare; ; ORF2 protein | 1075 |
| RLG_Hvul_Sukkula_AF427791-1 Hordeum vulgare; ; polyprotein | 685 |
| DTM_Hvul_HORMU_AF427791-1 Hordeum vulgare; ; transposase | 771 |
| RLC_Hvul_HORPIA2_AF427791-1 Hordeum vulgare; ; polyprotein | 1434 |
| DTA_Hvul_unnamed_AF427791-1 Hordeum vulgare; ; transposase | 227 |
| RLG_Hvul_BAGY2_AF427791-1 Hordeum vulgare; ; polyprotein | 1348 |
| RLC_Hvul_Usier_AF474982-1 Hordeum vulgare; ; polyprotein | 1130 |
| RLC_Hvul_Bianca_AF521177-1 Hordeum vulgare; ; polyprotein | 1054 |
| RLC_Hvul_HORPIA2_AF521177-1 Hordeum vulgare; ; polyprotein | 1435 |
| DXX_Hvul_George_AF521177-1 Hordeum vulgare; ; transposase | 831 |
| RIX_Hvul_unnamed_AY013246-1 Hordeum vulgare; ; polyprotein | 1613 |
| RLC_Hvul_Ikeros_AY013246-1 Hordeum vulgare; ; hypotehtical protein | 150 |
| RLC_Hvul_Inav_AY013246-1 Hordeum vulgare; ; polyprotein | 1610 |
| RLG_Hvul_Cereba_AY040832-1 Hordeum vulgare; ; polyprotein | 1720 |
| RLG_Hvul_Cereba_AY040832-2 Hordeum vulgare; ; polyprotein | 1717 |
| DTC_Hvul_Donald_AF474373-2 Hordeum vulgare; ; ORF2 protein | 1066 |
| RLC_Hvul_Elena_AY661558-1 Hordeum vulgare; ; polyprotein | 442 |
| DTM_Hvul_HORMU_AY661558-1 Hordeum vulgare; ; transposase | 804 |
| RLC_Hvul_HORPIA_A_AY661558-1 Hordeum vulgare; ; polyprotein ; | 1362 |
| RLC_Hvul_Inga_AY661558-2 Hordeum vulgare; ; polyprotein | 1996 |
| RLG_Hvul_Jeli_AY661558-1 Hordeum vulgare; ; polyprotein | 1937 |
| RLG_Hvul_Laura_AY661558-1 Hordeum vulgare; ; polyprotein | 1487 |
| RLC_Hvul_Rada_AY661558-1 Hordeum vulgare; ; polyprotein | 1163 |
| RLG_Hvul_Sukkula_AY661558-7 Hordeum vulgare; ; polyprotein | 1486 |
| DHH_Hvul_Hector_AY642926-1 Hordeum vulgare; ; helicase | 896 |
| DHH_Hvul_Hector_AY642926-1 Hordeum vulgare; ; helicase | 787 |
| DTA_Hvul_Harper_M801L24-1 Hordeum vulgare; ; polyprotein | 728 |
| DHH_Hvul_Tierry_Hn582D21-1 Hordeum vulgare; ; helicase | 502 |
| DTH_Hvul_Tiberius_HnBtr-1 Hordeum vulgare; ; Transposase (NULL) | 306 |
| DHH_Hvul_AA_consensus-1 Hordeum vulgare; ; RPA homolog | 1389 |
| DHH_Hvul_AA_consensus-1 Hordeum vulgare; ; RPA homolog | 529 |
| DHH_Hvul_AA_Hv6-15 Hordeum vulgare; ; RPA homolog | 1386 |
| DHH_Hvul_AA_Hv6-15 Hordeum vulgare; ; RPA homolog | 751 |
| DHH_Hvul_BA_Hv3-1 Hordeum vulgare; ; RPA homolog | 1370 |
| DHH_Hvul_BA_Hv3-1 Hordeum vulgare; ; RPA homolog | 499 |
| DHH_Hvul_BA_Hv3-32 Hordeum vulgare; ; RPA homolog | 1285 |
| DHH_Hvul_BB_consensus-1 Hordeum vulgare; ; RPA homolog | 1442 |
| DHH_Hvul_BB_consensus-1 Hordeum vulgare; ; RPA homolog | 653 |
| DHH_Hvul_BB_Hv2-05 Hordeum vulgare; ; RPA homolog | 1431 |
| DHH_Hvul_BC_Hv6-01 Hordeum vulgare; ; RPA homolog | 1383 |
| DHH_Hvul_BE_consensus-1 Hordeum vulgare; ; RPA homolog | 1442 |
| DHH_Hvul_BE_Hv6-31 Hordeum vulgare; ; RPA homolog | 1405 |
| DHH_Hvul_BE_Hv6-31 Hordeum vulgare; ; RPA homolog | 577 |
| DHH_Hvul_BE_Hv6-43 Hordeum vulgare; ; RPA homolog | 1356 |
| DHH_Hvul_BE_Hv6-43 Hordeum vulgare; ; RPA homolog | 638 |
| DHH_Hvul_BE_Hv6-43 Hordeum vulgare; ; RPA homolog | 281 |
| DHH_Hvul_BH_consensus-1 Hordeum vulgare; ; RPA homolog | 1362 |
| DHH_Hvul_BH_consensus-1 Hordeum vulgare; ; RPA homolog | 518 |
| DHH_Hvul_BK_Hv4-2 Hordeum vulgare; ; RPA homolog | 1402 |
| DHH_Hvul_BK_Hv4-2 Hordeum vulgare; ; RPA homolog | 440 |
| DHH_Hvul_BK_Hv6-18 Hordeum vulgare; ; RPA homolog | 440 |
| DHH_Hvul_BL_Hv2-13 Hordeum vulgare; ; RPA homolog | 1369 |
| DHH_Hvul_BM_consensus-1 Hordeum vulgare; ; RPA homolog | 1407 |
| DHH_Hvul_BM_consensus-1 Hordeum vulgare; ; RPA homolog | 533 |
| DHH_Hvul_BM_Hv3-1 Hordeum vulgare; ; RPA homolog | 1370 |
| DHH_Hvul_BM_Hv3-1 Hordeum vulgare; ; RPA homolog | 499 |
| DHH_Hvul_BM_Hv3-32 Hordeum vulgare; ; RPA homolog | 1285 |
| DHH_Hvul_Helios_consensus-1 Hordeum vulgare; ; RPA homolog | 1356 |
| DHH_Hvul_Helios_consensus-1 Hordeum vulgare; ; RPA homolog | 538 |
| DHH_Hvul_MA_consensus-1 Hordeum vulgare; ; RPA homolog | 343 |
| DHH_Hvul_MA_consensus-1 Hordeum vulgare; ; RPA homolog | 1434 |
| DHH_Hvul_MBA_consensus-1 Hordeum vulgare; ; RPA homolog | 312 |
| DHH_Hvul_MBA_consensus-1 Hordeum vulgare; ; RPA homolog | 1421 |
| DHH_Hvul_Mothra_consensus-1 Hordeum vulgare; ; RPA homolog | 620 |
| DHH_Hvul_Mothra_consensus-1 Hordeum vulgare; ; RPA homolog | 1494 |
| DHH_Hvul_Mothra_consensus-1 Hordeum vulgare; ; RPA homolog | 213 |
| DTM_Hvul_Farawake_A_consensus-1 Hordeum vulgare; ; transposase | 775 |
| DTM_Hvul_Farawake_B_consensus-1 Hordeum vulgare; ; transposase | 761 |
| DTM_Hvul_Farawake_D_Hv1-76 Hordeum vulgare; ; transposase | 651 |
| DTH_Hvul_Marimom_consensus-1 Hordeum vulgare; ; transposase | 420 |
| DTT_Hvul_Amom_RND-1 Hordeum vulgare; ; transposase | 449 |
| DTT_Hvul_Bmom_RND-1 Hordeum vulgare; ; transposase | 577 |
| DTT_Hvul_Cmom_consensus-1 Hordeum vulgare; ; transposase | 483 |
| DTT_Hvul_Dmom_consensus-1 Hordeum vulgare; ; transposase | 694 |
| RLG_Hvul_Abiba_consensus-1 Hordeum vulgare; ; polyprotein | 1512 |
| RLG_Hvul_BAGY2_consensus-2 Hordeum vulgare; ; polyprotein | 1593 |
| RLG_Hvul_WHAM_consensus-1 Hordeum vulgare; ; polyprotein | 912 |
| RLG_Hvul_Sabrina_A_consensus-1 Hordeum vulgare; ; polyprotein | 692 |
| RLC_Hvul_BARE1_BA1_consensus-3 Hordeum vulgare; ; polyprotein; variety=Morexv4; | 1327 |
| RLC_Hvul_BARE1_BA2_consensus-3 Hordeum vulgare; ; polyprotein; variety=Morexv4; | 1327 |
| RLC_Hvul_BARE1_BA3_consensus-3 Hordeum vulgare; ; polyprotein; variety=Morexv4; | 1327 |
| RLC_Hvul_BARE1_CA1_consensus-3 Hordeum vulgare; ; polyprotein; variety=Morexv4; | 1328 |
| RLC_Hvul_BARE1_CA2_consensus-3 Hordeum vulgare; ; polyprotein; variety=Morexv4; | 1328 |