TREP, the TRansposable Elements Platform
Fasta file for RLG elements in PTREP
Sequences: 113
Total size: 136027 aa
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| Sequence | Size |
|---|---|
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 2113 |
| RLG_Hvul_Sukkula_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 685 |
| RLG_Hvul_BAGY2_AF427791-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1348 |
| RLG_Tmon_WHAM_AY146588-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; gag | 940 |
| RLG_Tmon_Wilma_AY146588-3 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 1339 |
| RLG_Tmon_Erika_AF326781-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 1480 |
| RLG_Tmon_Fatima_B_AF326781-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; hypotehtical protein ; | 1213 |
| RLG_Hvul_Cereba_AY040832-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1720 |
| RLG_Hvul_Cereba_AY040832-2 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1717 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; hypotehtical protein 1 | 531 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; hypotehtical protein 2 | 1482 |
| RLG_Tmon_Daniela_AF326781-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; hypotehtical protein 3 | 360 |
| RLG_Tmon_Danae_231A16-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 2114 |
| RLG_Tmon_Erika_231A16-2 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 1479 |
| RLG_Hsap_Fatima_231A16-1 Homo sapiens; Retrotransposon, LTR, Gypsy; polyprotein | 1706 |
| RLG_Tmon_Fatima_B_609E6-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein ; | 867 |
| RLG_Tmon_Laura_719C13-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 1431 |
| RLG_Tmon_WHAM_231A16-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 934 |
| RLG_Tmon_Romani_AY188331-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 881 |
| RLG_Tmon_Jeli_AF459088-2 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 1336 |
| RLG_Tmon_Erika_AF459088-1 Triticum monococcum; Retrotransposon, LTR, Gypsy; polyprotein | 1498 |
| RLG_Hvul_Jeli_AY661558-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1937 |
| RLG_Hvul_Laura_AY661558-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1487 |
| RLG_Hvul_Sukkula_AY661558-7 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1486 |
| RLG_Taes_Daniela_10k23-1 Triticum aestivum; Retrotransposon, LTR, Gypsy; polyprotein | 2014 |
| RLG_Tunk_Fatima_B_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; transposase ; | 557 |
| RLG_Tunk_Fatima_B_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; ORF2 protein ; | 310 |
| RLG_Tunk_Fatima_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1704 |
| RLG_Tunk_Fatima_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; ORF2 protein | 415 |
| RLG_Scer_unnamed_AF222021-1 Secale cereale; Retrotransposon, LTR, Gypsy; polyprotein | 178 |
| RLG_Tunk_BAGY2_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1400 |
| RLG_Tunk_Carmilla_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 2141 |
| RLG_Tunk_Carmilla_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; ORF2 protein | 267 |
| RLG_Tunk_Erika_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1499 |
| RLG_Tunk_Fatima_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1703 |
| RLG_Tunk_Geneva_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 2335 |
| RLG_Tunk_Jeli_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1332 |
| RLG_Taes_Latidu_10k23-1 Triticum aestivum; Retrotransposon, LTR, Gypsy; polyprotein | 1537 |
| RLG_Tunk_Laura_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1491 |
| RLG_Tdur_Nusif_103H9-2 Triticum durum; Retrotransposon, LTR, Gypsy; polyprotein | 646 |
| RLG_Taes_Nusif_10k23-1 Triticum aestivum; Retrotransposon, LTR, Gypsy; ORF2 protein | 418 |
| RLG_Osat_OsTaz_consensus-1 Oryza sativa; Retrotransposon, LTR, Gypsy; polyprotein | 1185 |
| RLG_Tunk_Sabrina_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 691 |
| RLG_Tunk_WHAM_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; polyprotein | 925 |
| RLG_Sbic_Dagan_consensus-1 Sorghum bicolor; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1489 |
| RLG_Sbic_Damara_consensus-1 Sorghum bicolor; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1774 |
| RLG_Sbic_Eniola_RND-1 Sorghum bicolor; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1282 |
| RLG_Osat_hopi_RND-1 Oryza sativa; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 2052 |
| RLG_Osat_Osr30_RND-1 Oryza sativa; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1346 |
| RLG_Osat_Retrosat1_RND-1 Oryza sativa; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 2037 |
| RLG_Tunk_Haight_consensus-1 Triticum unknown; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1255 |
| RLG_Cele_GypsyB_RND-1 Caenorhabditis elegans; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1809 |
| RLG_Cele_GypsyE_RND-1 Caenorhabditis elegans; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1786 |
| RLG_Cele_GypsyF_RND-1 Caenorhabditis elegans; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1537 |
| RLG_Cele_GypsyG_RND-1 Caenorhabditis elegans; Retrotransposon, LTR, Gypsy; Polyprotein (NULL) | 1243 |
| RLG_Bgt_Asteria_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 987 |
| RLG_Bgt_Asteria_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 697 |
| RLG_Bgt_Demeter_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 195 |
| RLG_Bgt_Demeter_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 196 |
| RLG_Bgt_Demeter_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1235 |
| RLG_Bgt_Hestia_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; ORF1 | 395 |
| RLG_Bgt_Hestia_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1280 |
| RLG_Bgt_Nephele_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 377 |
| RLG_Bgt_Nephele_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1309 |
| RLG_Bgt_Niobe_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1713 |
| RLG_Bgt_Nyx_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1797 |
| RLG_Bgt_Phoebe_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1651 |
| RLG_Bgt_Selene_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 396 |
| RLG_Bgt_Selene_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1246 |
| RLG_Bgt_Sparta_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1899 |
| RLG_Bgt_Tethys_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1663 |
| RLG_Bgt_Theia_RND-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1656 |
| RLG_Dmel_Idefix_AJ009736-1 Drosophila melanogaster; Retrotransposon, LTR, Gypsy; polyprotein | 1150 |
| RLG_Dmel_Idefix_AJ009736-1 Drosophila melanogaster; Retrotransposon, LTR, Gypsy; gag protein | 340 |
| RLG_Dpur_CNA_RND-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 851 |
| RLG_Dpur_DpurA_consensus-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 1214 |
| RLG_Dpur_DpurA_consensus-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; gag protein | 397 |
| RLG_Dpur_DpurA_sc135-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 1220 |
| RLG_Dpur_DpurB_RND-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 1414 |
| RLG_Dpur_DpurC_RND-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 1385 |
| RLG_Dpur_DpurD_sc322-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 1207 |
| RLG_Dpur_DpurD_sc322-1 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; gag protein | 437 |
| RLG_Dpur_DpurE_RND-2 Dictyostelium purpureum; Retrotransposon, LTR, Gypsy; polyprotein | 1258 |
| RLG_Gthe_GtheA_RND-1 Guillardia theta; Retrotransposon, LTR, Gypsy; polyprotein | 1270 |
| RLG_Gthe_GtheB_RND-1 Guillardia theta; Retrotransposon, LTR, Gypsy; polyprotein | 1201 |
| RLG_Gthe_GtheC_consensus-1 Guillardia theta; Retrotransposon, LTR, Gypsy; polyprotein | 1683 |
| RLG_Gthe_GtheD_RND-1 Guillardia theta; Retrotransposon, LTR, Gypsy; polyprotein | 1278 |
| RLG_Pinf_PinfA_consensus-1 Phytophthora infestans; Retrotransposon, LTR, Gypsy; polyprotein | 1247 |
| RLG_Pmar_PmarA_RND-1 Perkinsus marinus; Retrotransposon, LTR, Gypsy; polyprotein | 1229 |
| RLG_Pmar_PmarB_RND-1 Perkinsus marinus; Retrotransposon, LTR, Gypsy; polyprotein | 1291 |
| RLG_Pmar_PmarC_RND-1 Perkinsus marinus; Retrotransposon, LTR, Gypsy; polyprotein | 1863 |
| RLG_Pmar_PmarD_RND-1 Perkinsus marinus; Retrotransposon, LTR, Gypsy; polyprotein | 1254 |
| RLG_Pmar_PmarD_RND-1 Perkinsus marinus; Retrotransposon, LTR, Gypsy; gag protein | 399 |
| RLG_Pmar_PmarE_RND-2 Perkinsus marinus; Retrotransposon, LTR, Gypsy; polyprotein | 1606 |
| RLG_Rhiz_RhizA_sc11-1 Rhizaria unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1658 |
| RLG_Rhiz_RhizA_sc2-1 Rhizaria unknown; Retrotransposon, LTR, Gypsy; polyprotein | 1658 |
| RLG_Osat_GA_Og3-1 Oryza sativa; Retrotransposon, LTR, Gypsy; polyprotein | 793 |
| RLG_Osat_GA_Og3-1 Oryza sativa; Retrotransposon, LTR, Gypsy; polyprotein | 793 |
| RLG_Bgt_Medea_consensus-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1337 |
| RLG_Bgt_Medea_consensus-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; GAG | 506 |
| RLG_Hvul_Abiba_consensus-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1512 |
| RLG_Taes_Abiba_A_consensus-1 Triticum aestivum; Retrotransposon, LTR, Gypsy; polyprotein | 1500 |
| RLG_Taes_Abiba_A_consensus-1 Triticum aestivum; Retrotransposon, LTR, Gypsy; GAG | 337 |
| RLG_Hvul_BAGY2_consensus-2 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 1593 |
| RLG_Hvul_WHAM_consensus-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 912 |
| RLG_Hvul_Sabrina_A_consensus-1 Hordeum vulgare; Retrotransposon, LTR, Gypsy; polyprotein | 692 |
| RLG_Atal_Athila_B_At1-1 Arabidopsis thaliana; Retrotransposon, LTR, Gypsy; polyprotein | 1755 |
| RLG_Atal_Athila_B_At1-1 Arabidopsis thaliana; Retrotransposon, LTR, Gypsy; GAG | 219 |
| RLG_Bgt_Loonie_consensus-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; polyprotein | 1223 |
| RLG_Bgt_Loonie_consensus-1 Blumeria graminis_tritici; Retrotransposon, LTR, Gypsy; GAG | 427 |
| RLG_Scey_Ty3_ChrIX-1 Saccharomyces cerevisiae; Retrotransposon, LTR, Gypsy; polyprotein | 1222 |
| RLG_Scey_Ty3_ChrIX-1 Saccharomyces cerevisiae; Retrotransposon, LTR, Gypsy; GAG | 291 |
| RLG_Scey_Ty3_ChrVII-6 Saccharomyces cerevisiae; Retrotransposon, LTR, Gypsy; polyprotein | 1271 |