TREP, the TRansposable Elements Platform
Fasta file for RIX elements in PTREP
Sequences: 141
Total size: 120054 aa
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| Sequence | Size |
|---|---|
| RIX_Tmon_Ramona_109N23-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1236 |
| RIX_Taes_Ramona_464G14-1 Triticum aestivum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 978 |
| RIX_Tdur_Stasy_294D11-1 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1040 |
| RIX_Hvul_Yolanda_AY853252-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 689 |
| RIX_Tura_Nala_210J24-1 Triticum urartu; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1817 |
| RIX_Tdur_Karin_AY146587-1 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; ORF1 protein | 605 |
| RIX_Tdur_Karin_AY146587-1 Triticum durum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1380 |
| RIX_Tmon_Karin_AY146588-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 449 |
| RIX_Hvul_unnamed_AY013246-1 Hordeum vulgare; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1613 |
| RIX_Tmon_Isabelle_AF326781-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 2388 |
| RIX_Tmon_Yvonne_AY146588-1 Triticum monococcum; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1135 |
| RIX_Tunk_Karin_consensus-1 Triticum unknown; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1223 |
| RIX_Tunk_Karin_consensus-1 Triticum unknown; Retrotransposon, non-LTR (SINE), unknown; ORF1 protein | 937 |
| RIX_Bdis_BdisA_Bd3-1 Brachypodium distachyon; Retrotransposon, non-LTR (SINE), unknown; Polyprotein (NULL) | 964 |
| RIX_Bdis_BdisB_consensus-1 Brachypodium distachyon; Retrotransposon, non-LTR (SINE), unknown; Polyprotein (NULL) | 1164 |
| RIX_Bdis_BdisB_consensus-1 Brachypodium distachyon; Retrotransposon, non-LTR (SINE), unknown; ORF-2 protein (NULL) | 845 |
| RIX_Bgh_Ragda_RND-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 498 |
| RIX_Bgh_Ragda_RND-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1082 |
| RIX_Bgh_Satine_RND-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 618 |
| RIX_Bgh_Satine_RND-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1007 |
| RIX_Bgh_Shaka_RND-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 475 |
| RIX_Bgh_Shaka_RND-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 845 |
| RIX_Bgh_Tara_consensus-1 Blumeria graminis_hordei; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 547 |
| RIX_Bgt_Ama_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 164 |
| RIX_Bgt_Ama_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1224 |
| RIX_Bgt_Amitabha_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 631 |
| RIX_Bgt_Amitabha_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1317 |
| RIX_Bgt_Aves_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 520 |
| RIX_Bgt_Aves_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1236 |
| RIX_Bgt_Baku_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 505 |
| RIX_Bgt_Baku_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1306 |
| RIX_Bgt_Baras_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 290 |
| RIX_Bgt_Benten_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 308 |
| RIX_Bgt_Benten_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1315 |
| RIX_Bgt_Caia_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 480 |
| RIX_Bgt_Egaya_consensus-5 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 503 |
| RIX_Bgt_Fuji_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 520 |
| RIX_Bgt_Fuji_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1306 |
| RIX_Bgt_Gaomei_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Gaomei_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1324 |
| RIX_Bgt_Inari_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 699 |
| RIX_Bgt_Inari_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1231 |
| RIX_Bgt_Inari_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 552 |
| RIX_Bgt_Izanami_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 519 |
| RIX_Bgt_Izanami_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1287 |
| RIX_Bgt_Jata_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 215 |
| RIX_Bgt_Jata_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1294 |
| RIX_Bgt_Jizo_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1315 |
| RIX_Bgt_Kojin_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 192 |
| RIX_Bgt_Kojin_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 647 |
| RIX_Bgt_Miro_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 527 |
| RIX_Bgt_Miro_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1342 |
| RIX_Bgt_Rabia_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Rabia_RND-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 590 |
| RIX_Bgt_Saria_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 627 |
| RIX_Bgt_Wannabe_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 555 |
| RIX_Rhiz_RhizA_RND-1 Rhizaria unknown; Retrotransposon, non-LTR (SINE), unknown; fragment | 1212 |
| RIX_Rhiz_RhizA_RND-1 Rhizaria unknown; Retrotransposon, non-LTR (SINE), unknown; fragment | 397 |
| RIX_Bgt_LA_RND-NULL Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 472 |
| RIX_Bgt_LC_RND-NULL Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 483 |
| RIX_Bgt_LB_RND-NULL Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 484 |
| RIX_Osat_Rare1_Og11-1 Oryza sativa; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 860 |
| RIX_Osat_Rare1_Og11-1 Oryza sativa; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 821 |
| RIX_Bgt_Deimos_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 455 |
| RIX_Bgt_Itera_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1251 |
| RIX_Bgt_Itera_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 445 |
| RIX_Bgt_Phobos_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1169 |
| RIX_Bgt_Phobos_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 465 |
| RIX_Bgt_Phoebus_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1138 |
| RIX_Bgt_Phoebus_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 459 |
| RIX_Bgt_LC_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1256 |
| RIX_Bgt_LC_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 447 |
| RIX_Bgt_Irina_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1254 |
| RIX_Bgt_Irina_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 530 |
| RIX_Bgt_Daedalus_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1268 |
| RIX_Bgt_Daedalus_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 417 |
| RIX_Bgt_Kastor_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1289 |
| RIX_Bgt_Kastor_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 495 |
| RIX_Bgt_Aphrodite_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1308 |
| RIX_Bgt_Aphrodite_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 494 |
| RIX_Bgt_Artemis_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1286 |
| RIX_Bgt_Artemis_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Pollux_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1297 |
| RIX_Bgt_Pollux_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Sappho_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1298 |
| RIX_Bgt_Sappho_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 575 |
| RIX_Bgt_Satine_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 548 |
| RIX_Bgt_Calypso_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1305 |
| RIX_Bgt_Calypso_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Aphrodite_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 494 |
| RIX_Bgt_Benten_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1352 |
| RIX_Bgt_Gaomei_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1324 |
| RIX_Bgt_Gaomei_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Izanami_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1287 |
| RIX_Bgt_Izanami_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 519 |
| RIX_Bgt_Amitabha_consensus-3 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 393 |
| RIX_Bgt_Daedalus_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1309 |
| RIX_Bgt_Daedalus_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 500 |
| RIX_Bgt_Fuji_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1306 |
| RIX_Bgt_Fuji_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 520 |
| RIX_Bgt_Gaomei_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Izanami_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1287 |
| RIX_Bgt_Izanami_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 519 |
| RIX_Bgt_Jizo_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1315 |
| RIX_Bgt_Jizo_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 486 |
| RIX_Bgt_Pele_consensus-3 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 483 |
| RIX_Bgt_Phobos_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1170 |
| RIX_Bgt_Phobos_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 465 |
| RIX_Bgt_Phoebus_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 968 |
| RIX_Bgt_Phoebus_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 459 |
| RIX_Bgt_Pollux_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1297 |
| RIX_Bgt_Pollux_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 510 |
| RIX_Bgt_Sappho_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1298 |
| RIX_Bgt_Sappho_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 560 |
| RIX_Bgt_Satine_B_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1232 |
| RIX_Bgt_Satine_B_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 618 |
| RIX_Bgt_Satine_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1232 |
| RIX_Bgt_Satine_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 618 |
| RIX_Bgt_Aphrodite_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1309 |
| RIX_Bgt_Gaomei_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1321 |
| RIX_Bgt_Irina_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1253 |
| RIX_Bgt_Irina_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 530 |
| RIX_Bgt_Jizo_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1315 |
| RIX_Bgt_Irina_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF2 | 505 |
| RIX_Bgt_Amitabha_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; reverse transcriptase | 1235 |
| RIX_Bgt_Amitabha_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 631 |
| RIX_Bgt_Deimos_consensus-2 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 473 |
| RIX_Bgt_Amitabha_B_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1235 |
| RIX_Bgt_Amitabha_B_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 631 |
| RIX_Bgt_Amitabha_C_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1235 |
| RIX_Bgt_Amitabha_C_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 631 |
| RIX_Bgt_Inari_C_Bgt_chr-10 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 655 |
| RIX_Bgt_Inari_D_Bgt_chr-02 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1231 |
| RIX_Bgt_Inari_D_Bgt_chr-02 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 658 |
| RIX_Bgt_Inari_F_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 901 |
| RIX_Bgt_Inari_F_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 414 |
| RIX_Bgt_Inari_F_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF2 | 552 |
| RIX_Bgt_Inari_G_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; polyprotein | 1231 |
| RIX_Bgt_Inari_G_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 658 |
| RIX_Bgt_Inari_G_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF2 | 552 |
| RIX_Bgt_Kiha_A_consensus-1 Blumeria graminis_tritici; Retrotransposon, non-LTR (SINE), unknown; ORF1 | 553 |