Databases available for BLAST searches
Nucleotide Sequence Databases
- nrTREP19 (1,866 sequences)
- The non-redundant database contains only one or
very few copies of the different types of repetitive elements in
order to make Blast searches more efficient.
- total_TREP19 (4,162 sequences)
- The complete database contains all elements which
were submitted and allows studies of the different types of elements.
Peptide Sequence Databases
- PTREP19 (800 sequences)
- The database of hypothetical proteins comprises
predicted proteins encoded by the repeat sequences.
